Strain Fitness in Pseudomonas putida KT2440 around PP_0152

Experiment: pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4
160,140	+		PP_0149	0.87	-0.0
160,140	+		PP_0149	0.87	+3.4
160,159	+		PP_0149	0.88	-0.2
160,274	+				-1.1
160,275	-				+1.4
160,397	+				+1.5
160,413	-				+0.9
160,459	+		PP_0150	0.23	+0.7
160,460	-		PP_0150	0.23	+1.0
160,460	-		PP_0150	0.23	-0.4
160,481	+		PP_0150	0.30	+0.5
160,739	+				+1.4
160,739	+				-1.0
160,740	-				-1.1
160,740	-				+0.7
160,740	-				+0.4
160,740	-				-2.9
160,740	-				-1.9
160,743	+				-0.5
160,743	+				+1.0
160,744	-				-0.4
160,744	-				+0.3
160,808	+		PP_0151	0.22	-1.6
160,809	-		PP_0151	0.23	+0.7
160,894	+		PP_0151	0.52	+1.0
160,894	+		PP_0151	0.52	-1.6
160,894	+		PP_0151	0.52	-0.3
160,941	+		PP_0151	0.68	+0.4
160,942	-		PP_0151	0.68	+2.0
161,029	-				-0.1
161,351	-		PP_0152	0.59	+1.8
161,433	+		PP_0152	0.81	+1.0
161,434	-		PP_0152	0.81	-0.4
161,481	-				+0.4
161,529	+				-0.1
161,568	+				-2.7
161,858	+		PP_0153	0.50	+0.4
161,858	+		PP_0153	0.50	+0.3
161,859	-		PP_0153	0.50	-0.1
161,957	+				-0.8
161,958	-				+4.5
161,958	-				-1.0
161,997	+				+1.0
161,998	-				+1.4
162,001	+				+0.6
162,001	+				+0.3
162,002	-				+0.7
162,049	-				-0.1
162,052	+				-1.9
162,053	-				+1.4
162,082	+				-2.7
162,207	-				+1.5
162,241	-				+0.4
162,246	+				+0.3
162,246	+				-1.5
162,246	+				+0.4
162,247	-				+0.4
162,264	-				+0.4
162,447	-				-1.9
162,468	-				-1.2