Experiment: Acetovanillone 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu8123 and Atu8124 are separated by 164 nucleotides
Atu8123: Atu8123 - hypothetical protein, at 437,097 to 437,330
Atu8123
Atu8124: Atu8124 - hypothetical protein, at 437,495 to 437,917
Atu8124
Position (kb) 437
438 Strain fitness (log2 ratio) -2
-1
0
1
2 at 436.137 kb on - strand at 436.176 kb on + strand at 436.222 kb on + strand at 436.222 kb on - strand at 436.258 kb on - strand at 436.280 kb on + strand at 436.280 kb on + strand at 436.280 kb on + strand at 436.306 kb on - strand at 436.323 kb on - strand at 436.332 kb on + strand at 436.364 kb on + strand at 436.380 kb on + strand at 436.386 kb on - strand at 436.413 kb on + strand at 436.421 kb on - strand at 436.447 kb on + strand at 436.489 kb on - strand at 436.522 kb on + strand at 436.530 kb on - strand at 436.604 kb on - strand at 436.764 kb on - strand at 436.799 kb on + strand at 436.814 kb on + strand at 436.898 kb on - strand at 436.981 kb on + strand at 436.986 kb on + strand at 436.989 kb on - strand at 436.997 kb on - strand at 436.999 kb on + strand at 437.080 kb on - strand at 437.087 kb on - strand at 437.129 kb on + strand, within Atu8123 at 437.214 kb on + strand, within Atu8123 at 437.214 kb on + strand, within Atu8123 at 437.266 kb on - strand, within Atu8123 at 437.387 kb on + strand at 437.493 kb on + strand at 437.501 kb on - strand at 437.631 kb on + strand, within Atu8124 at 437.631 kb on + strand, within Atu8124 at 437.631 kb on + strand, within Atu8124 at 437.639 kb on - strand, within Atu8124 at 437.639 kb on - strand, within Atu8124 at 437.639 kb on - strand, within Atu8124 at 437.639 kb on - strand, within Atu8124 at 437.639 kb on - strand, within Atu8124 at 437.671 kb on - strand, within Atu8124 at 437.751 kb on + strand, within Atu8124 at 437.754 kb on - strand, within Atu8124 at 437.759 kb on - strand, within Atu8124 at 437.920 kb on + strand at 437.922 kb on - strand at 437.922 kb on - strand at 437.928 kb on - strand at 438.016 kb on + strand at 438.269 kb on + strand at 438.269 kb on + strand at 438.273 kb on + strand at 438.277 kb on - strand at 438.277 kb on - strand at 438.281 kb on - strand at 438.305 kb on + strand at 438.313 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Acetovanillone 5 mM remove 436,137 - +1.2 436,176 + +1.8 436,222 + +0.6 436,222 - +1.1 436,258 - +1.0 436,280 + +0.8 436,280 + +1.2 436,280 + +1.0 436,306 - +0.8 436,323 - +0.9 436,332 + +0.9 436,364 + +1.1 436,380 + +1.9 436,386 - +1.1 436,413 + +1.2 436,421 - +0.8 436,447 + +1.5 436,489 - +1.4 436,522 + +1.5 436,530 - +1.5 436,604 - +1.5 436,764 - +0.5 436,799 + +0.5 436,814 + +1.1 436,898 - +0.8 436,981 + +1.5 436,986 + +0.8 436,989 - +0.3 436,997 - +0.5 436,999 + +0.5 437,080 - -0.1 437,087 - +0.2 437,129 + Atu8123 0.14 +0.7 437,214 + Atu8123 0.50 +0.6 437,214 + Atu8123 0.50 +0.4 437,266 - Atu8123 0.72 +0.1 437,387 + +0.6 437,493 + +0.5 437,501 - +0.2 437,631 + Atu8124 0.32 +0.4 437,631 + Atu8124 0.32 +1.3 437,631 + Atu8124 0.32 +1.2 437,639 - Atu8124 0.34 +0.8 437,639 - Atu8124 0.34 +0.9 437,639 - Atu8124 0.34 +0.9 437,639 - Atu8124 0.34 +0.2 437,639 - Atu8124 0.34 +0.3 437,671 - Atu8124 0.42 +0.7 437,751 + Atu8124 0.61 +1.9 437,754 - Atu8124 0.61 +0.6 437,759 - Atu8124 0.62 +0.6 437,920 + +0.8 437,922 - +0.7 437,922 - +0.7 437,928 - -0.2 438,016 + +0.7 438,269 + +1.5 438,269 + -0.7 438,273 + -1.0 438,277 - -1.3 438,277 - -0.1 438,281 - -0.1 438,305 + -0.2 438,313 - -1.8
Or see this region's nucleotide sequence