Experiment: Acetovanillone 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0438 and Atu8122 are separated by 282 nucleotides
Atu0438: Atu0438 - phage-related integrase, at 433,831 to 434,859
Atu0438
Atu8122: Atu8122 - hypothetical protein, at 435,142 to 436,047
Atu8122
Position (kb) 435
436
437 Strain fitness (log2 ratio) -1
0
1
2 at 434.166 kb on + strand, within Atu0438 at 434.336 kb on + strand, within Atu0438 at 434.336 kb on + strand, within Atu0438 at 434.336 kb on + strand, within Atu0438 at 434.344 kb on - strand, within Atu0438 at 434.344 kb on - strand, within Atu0438 at 434.354 kb on - strand, within Atu0438 at 434.382 kb on + strand, within Atu0438 at 434.389 kb on + strand, within Atu0438 at 434.392 kb on + strand, within Atu0438 at 434.395 kb on - strand, within Atu0438 at 434.400 kb on - strand, within Atu0438 at 434.400 kb on - strand, within Atu0438 at 434.400 kb on - strand, within Atu0438 at 434.418 kb on + strand, within Atu0438 at 434.450 kb on - strand, within Atu0438 at 434.507 kb on + strand, within Atu0438 at 434.573 kb on + strand, within Atu0438 at 434.575 kb on + strand, within Atu0438 at 434.583 kb on - strand, within Atu0438 at 434.600 kb on - strand, within Atu0438 at 434.612 kb on - strand, within Atu0438 at 434.663 kb on + strand, within Atu0438 at 434.671 kb on - strand, within Atu0438 at 434.671 kb on - strand, within Atu0438 at 434.676 kb on - strand, within Atu0438 at 434.708 kb on + strand, within Atu0438 at 434.731 kb on + strand, within Atu0438 at 434.784 kb on - strand at 434.820 kb on + strand at 434.820 kb on + strand at 434.821 kb on - strand at 434.821 kb on - strand at 434.821 kb on - strand at 434.994 kb on + strand at 434.996 kb on + strand at 435.028 kb on + strand at 435.083 kb on - strand at 435.207 kb on + strand at 435.207 kb on + strand at 435.207 kb on + strand at 435.207 kb on + strand at 435.207 kb on + strand at 435.229 kb on - strand at 435.260 kb on - strand, within Atu8122 at 435.446 kb on + strand, within Atu8122 at 435.488 kb on + strand, within Atu8122 at 435.489 kb on + strand, within Atu8122 at 435.688 kb on - strand, within Atu8122 at 435.744 kb on - strand, within Atu8122 at 435.836 kb on + strand, within Atu8122 at 435.857 kb on + strand, within Atu8122 at 435.949 kb on - strand, within Atu8122 at 435.949 kb on - strand, within Atu8122 at 435.973 kb on - strand at 435.991 kb on + strand at 436.050 kb on - strand at 436.137 kb on - strand at 436.176 kb on + strand at 436.222 kb on + strand at 436.222 kb on - strand at 436.258 kb on - strand at 436.280 kb on + strand at 436.280 kb on + strand at 436.280 kb on + strand at 436.306 kb on - strand at 436.323 kb on - strand at 436.332 kb on + strand at 436.364 kb on + strand at 436.380 kb on + strand at 436.386 kb on - strand at 436.413 kb on + strand at 436.421 kb on - strand at 436.447 kb on + strand at 436.489 kb on - strand at 436.522 kb on + strand at 436.530 kb on - strand at 436.604 kb on - strand at 436.764 kb on - strand at 436.799 kb on + strand at 436.814 kb on + strand at 436.898 kb on - strand at 436.981 kb on + strand at 436.986 kb on + strand at 436.989 kb on - strand at 436.997 kb on - strand at 436.999 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Acetovanillone 5 mM remove 434,166 + Atu0438 0.33 +1.3 434,336 + Atu0438 0.49 +0.1 434,336 + Atu0438 0.49 +0.8 434,336 + Atu0438 0.49 +0.9 434,344 - Atu0438 0.50 +0.7 434,344 - Atu0438 0.50 +0.8 434,354 - Atu0438 0.51 +1.2 434,382 + Atu0438 0.54 +1.1 434,389 + Atu0438 0.54 +0.8 434,392 + Atu0438 0.55 +0.2 434,395 - Atu0438 0.55 +1.2 434,400 - Atu0438 0.55 +0.8 434,400 - Atu0438 0.55 +0.6 434,400 - Atu0438 0.55 +1.5 434,418 + Atu0438 0.57 +0.7 434,450 - Atu0438 0.60 +0.9 434,507 + Atu0438 0.66 +1.4 434,573 + Atu0438 0.72 +0.7 434,575 + Atu0438 0.72 +1.9 434,583 - Atu0438 0.73 +0.9 434,600 - Atu0438 0.75 +1.5 434,612 - Atu0438 0.76 +1.0 434,663 + Atu0438 0.81 +0.7 434,671 - Atu0438 0.82 +0.7 434,671 - Atu0438 0.82 +0.9 434,676 - Atu0438 0.82 +1.3 434,708 + Atu0438 0.85 +1.0 434,731 + Atu0438 0.87 +0.7 434,784 - +0.6 434,820 + +1.1 434,820 + +0.4 434,821 - +2.4 434,821 - +1.8 434,821 - +1.2 434,994 + +0.9 434,996 + +0.7 435,028 + +0.8 435,083 - +0.5 435,207 + +0.3 435,207 + -0.4 435,207 + +0.9 435,207 + +1.2 435,207 + +1.7 435,229 - +1.2 435,260 - Atu8122 0.13 +1.0 435,446 + Atu8122 0.34 +1.2 435,488 + Atu8122 0.38 +1.0 435,489 + Atu8122 0.38 -1.5 435,688 - Atu8122 0.60 +0.6 435,744 - Atu8122 0.66 +1.0 435,836 + Atu8122 0.77 +1.3 435,857 + Atu8122 0.79 +0.9 435,949 - Atu8122 0.89 +2.3 435,949 - Atu8122 0.89 +0.3 435,973 - +0.6 435,991 + +0.9 436,050 - +1.0 436,137 - +1.2 436,176 + +1.8 436,222 + +0.6 436,222 - +1.1 436,258 - +1.0 436,280 + +0.8 436,280 + +1.2 436,280 + +1.0 436,306 - +0.8 436,323 - +0.9 436,332 + +0.9 436,364 + +1.1 436,380 + +1.9 436,386 - +1.1 436,413 + +1.2 436,421 - +0.8 436,447 + +1.5 436,489 - +1.4 436,522 + +1.5 436,530 - +1.5 436,604 - +1.5 436,764 - +0.5 436,799 + +0.5 436,814 + +1.1 436,898 - +0.8 436,981 + +1.5 436,986 + +0.8 436,989 - +0.3 436,997 - +0.5 436,999 + +0.5
Or see this region's nucleotide sequence