Strain Fitness in Agrobacterium fabrum C58 around Atu4773

Experiment: Acetovanillone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetovanillone 5 mM
1,940,978	+		Atu4771	0.84	+0.0
1,941,032	+		Atu4771	0.88	+0.4
1,941,230	+		Atu4772	0.11	-0.1
1,941,261	-		Atu4772	0.17	+0.3
1,941,277	+		Atu4772	0.21	-0.0
1,941,397	+		Atu4772	0.47	+0.0
1,941,472	-		Atu4772	0.63	-0.4
1,941,631	-				+0.2
1,941,648	-				+0.5
1,941,648	-				+0.0
1,941,648	-				-0.4
1,941,681	-				-0.0
1,941,747	-				-0.3
1,941,751	+				+0.1
1,941,914	+				-0.1
1,941,922	-				-0.4
1,941,924	+				-0.1
1,941,975	-				-0.1
1,942,026	-		Atu4773	0.15	-0.4
1,942,086	-		Atu4773	0.31	-0.8
1,942,316	-				-0.7
1,942,389	-				-0.1
1,942,548	-		Atu4774	0.21	-0.3
1,942,583	+		Atu4774	0.27	+0.0
1,942,599	+		Atu4774	0.29	-2.4
1,942,607	-		Atu4774	0.30	+0.0
1,942,647	-		Atu4774	0.36	-0.1
1,942,659	+		Atu4774	0.38	-0.2
1,942,667	-		Atu4774	0.39	+0.2
1,942,705	+		Atu4774	0.45	-0.1
1,942,705	+		Atu4774	0.45	-0.4
1,942,705	+		Atu4774	0.45	+0.1
1,942,713	-		Atu4774	0.46	-0.2
1,942,715	+		Atu4774	0.47	+0.1
1,942,768	+		Atu4774	0.55	+0.9
1,942,773	+		Atu4774	0.56	-0.2
1,942,897	+		Atu4774	0.74	-0.9
1,942,897	+		Atu4774	0.74	-0.5
1,942,941	-		Atu4774	0.81	-0.2
1,942,941	-		Atu4774	0.81	-0.8
1,943,055	+				-0.1
1,943,055	+				-2.3
1,943,055	+				-0.2
1,943,063	-				+0.1
1,943,064	+				-0.2
1,943,240	-		Atu4775	0.12	-0.5
1,943,240	-		Atu4775	0.12	-1.4
1,943,240	-		Atu4775	0.12	-0.5
1,943,264	+		Atu4775	0.13	-0.3
1,943,272	-		Atu4775	0.14	+0.1