Strain Fitness in Agrobacterium fabrum C58 around Atu4161

Experiment: Acetovanillone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetovanillone 5 mM
1,278,560	+		Atu4159	0.34	-0.4
1,278,653	+		Atu4159	0.53	-0.3
1,278,684	-		Atu4159	0.60	+0.1
1,278,694	-		Atu4159	0.62	+0.5
1,278,708	-		Atu4159	0.65	+0.6
1,278,742	+		Atu4159	0.72	-0.5
1,278,825	+		Atu4159	0.90	+0.2
1,278,826	-				+0.6
1,278,840	+				+0.4
1,278,968	+				+1.3
1,278,976	-				-0.0
1,278,976	-				-0.2
1,279,035	+		Atu4160	0.17	-0.3
1,279,054	+		Atu4160	0.20	-0.4
1,279,062	-		Atu4160	0.22	-0.1
1,279,232	+		Atu4160	0.51	+0.4
1,279,232	+		Atu4160	0.51	-0.5
1,279,240	-		Atu4160	0.53	+0.4
1,279,240	-		Atu4160	0.53	-0.3
1,279,240	-		Atu4160	0.53	-1.4
1,279,383	+		Atu4160	0.78	-0.4
1,279,392	+		Atu4160	0.80	-0.9
1,279,400	-		Atu4160	0.81	+0.1
1,279,404	+		Atu4160	0.82	-0.3
1,279,521	-				+0.0
1,279,544	-		Atu4161	0.18	+0.0
1,279,614	-		Atu4161	0.52	-1.3
1,279,882	+				+0.5
1,279,939	-		Atu4162	0.11	+0.4
1,280,056	-		Atu4162	0.26	+0.5
1,280,059	+		Atu4162	0.26	+0.2
1,280,110	+		Atu4162	0.33	+0.0
1,280,110	+		Atu4162	0.33	+0.1
1,280,110	+		Atu4162	0.33	+0.7
1,280,118	-		Atu4162	0.34	+0.0
1,280,157	+		Atu4162	0.39	+0.0
1,280,159	+		Atu4162	0.39	+0.1
1,280,165	-		Atu4162	0.40	+0.4
1,280,199	-		Atu4162	0.44	+0.0
1,280,215	+		Atu4162	0.46	-0.7
1,280,223	-		Atu4162	0.47	-0.1
1,280,301	-		Atu4162	0.57	-0.3
1,280,302	-		Atu4162	0.57	+0.2
1,280,328	-		Atu4162	0.60	-0.1
1,280,386	+		Atu4162	0.67	-0.2