Strain Fitness in Agrobacterium fabrum C58 around Atu4061
Experiment: Acetovanillone 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Acetovanillone 5 mM |
---|---|---|---|---|---|
remove | |||||
1,179,481 | + | -0.4 | |||
1,179,502 | - | +2.0 | |||
1,179,588 | + | -0.4 | |||
1,179,605 | + | +1.3 | |||
1,179,781 | + | Atu4061 | 0.68 | +0.2 | |
1,179,789 | - | Atu4061 | 0.71 | +0.6 | |
1,179,860 | + | +0.1 | |||
1,179,879 | - | +0.3 | |||
1,179,971 | + | +0.2 | |||
1,180,063 | - | +2.0 | |||
1,180,097 | + | -0.2 | |||
1,180,131 | + | -0.1 | |||
1,180,131 | + | -0.9 | |||
1,180,139 | - | -0.2 | |||
1,180,583 | + | -0.2 | |||
1,180,848 | - | Atu4063 | 0.33 | -0.1 |
Or see this region's nucleotide sequence