Strain Fitness in Agrobacterium fabrum C58 around Atu3851

Experiment: Acetovanillone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetovanillone 5 mM
942,042	+		Atu3849	0.41	+0.4
942,050	-		Atu3849	0.42	-0.4
942,136	+		Atu3849	0.56	-0.0
942,144	-		Atu3849	0.57	-0.4
942,198	-		Atu3849	0.66	-0.1
942,280	+		Atu3849	0.79	+0.3
942,288	-		Atu3849	0.80	-0.2
942,351	+		Atu3849	0.90	+0.1
942,351	+		Atu3849	0.90	-0.1
942,374	-				+0.1
942,411	-				+0.2
942,425	+				+0.1
942,459	-		Atu3850	0.16	-0.2
942,459	-		Atu3850	0.16	-0.1
942,474	-		Atu3850	0.21	-0.0
942,548	-		Atu3850	0.46	+0.0
942,627	-		Atu3850	0.73	-0.2
942,652	+		Atu3850	0.82	-0.1
942,661	+		Atu3850	0.85	+0.2
942,691	+				-0.4
942,691	+				+0.5
942,699	+				-0.3
942,699	-				-0.6
942,699	-				-0.1
942,699	-				+0.2
942,702	-				-0.2
942,707	-				+0.0
942,738	-				-0.1
942,743	-				+0.2
942,744	-				+0.4
942,757	-				-0.5
942,758	-				+0.4
942,773	-				+0.4
942,820	+				+0.0
942,825	+				+0.6
942,867	-				-0.0
942,943	-				+1.0
942,946	+				+0.2
942,946	+				-0.6
942,954	-				+0.3
943,019	+				+0.0
943,019	+				-0.3
943,027	-				-0.5
943,027	-				+0.0
943,027	-				-0.2
943,027	-				+0.8
943,027	-				-1.2
943,125	+		Atu3851	0.39	+1.0
943,155	+		Atu3851	0.49	-0.1
943,163	-		Atu3851	0.51	+0.3
943,206	+		Atu3851	0.65	+0.1
943,206	+		Atu3851	0.65	+0.2
943,214	+		Atu3851	0.68	+0.2
943,222	-		Atu3851	0.71	-0.0
943,222	-		Atu3851	0.71	+0.4
943,240	+		Atu3851	0.77	+0.4
943,312	+				+0.0
943,356	+		Atu3852	0.13	-0.4
943,364	-		Atu3852	0.16	-0.5
943,400	-		Atu3852	0.30	-0.2
943,400	-		Atu3852	0.30	+0.3
943,400	-		Atu3852	0.30	+0.3
943,400	-		Atu3852	0.30	-0.4
943,421	-		Atu3852	0.37	+0.4
943,421	-		Atu3852	0.37	-0.2
943,556	+		Atu3852	0.88	-0.2
943,564	-				+0.4
943,660	+				+0.2
943,678	-				-0.4
943,697	-				-0.6
943,697	-				+0.3
943,754	+				-1.0
943,803	-		Atu3853	0.35	-0.0
943,830	-		Atu3853	0.50	-0.2
943,835	-		Atu3853	0.53	-0.3
943,835	-		Atu3853	0.53	+0.1
943,844	+		Atu3853	0.58	+0.1
943,871	+		Atu3853	0.73	-1.3
943,871	+		Atu3853	0.73	+0.1
943,871	+		Atu3853	0.73	-1.6
943,879	-		Atu3853	0.78	-0.2
943,879	-		Atu3853	0.78	-0.0
943,883	+		Atu3853	0.80	+0.5
943,883	+		Atu3853	0.80	-0.8
943,926	+				-0.1
943,934	-				+0.2
943,955	-				-0.4
944,023	+				-1.4
944,090	-				-0.0
944,117	+				+0.2
944,120	-				-0.1
944,122	+				-0.1
944,125	-				-0.2
944,125	-				-0.2
944,125	-				-0.1
944,125	-				-0.9
944,128	+				-0.6
944,135	-				+1.0
944,152	+				-0.1
944,180	-				+0.1
944,182	+				-0.4
944,182	+				-0.4
944,190	-				-0.2
944,190	-				+0.0
944,190	-				+0.4
944,190	-				+1.6
944,242	+				-0.2
944,255	+				-0.2
944,265	-				-0.2