Strain Fitness in Agrobacterium fabrum C58 around Atu3089

Experiment: Acetovanillone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetovanillone 5 mM
93,898	-		Atu3088	0.26	+0.3
93,909	+		Atu3088	0.27	-0.2
93,910	+		Atu3088	0.27	-0.2
93,917	-		Atu3088	0.27	-0.2
93,918	-		Atu3088	0.27	-0.0
93,931	+		Atu3088	0.28	+0.5
94,071	-		Atu3088	0.39	+0.0
94,081	-		Atu3088	0.40	+0.1
94,097	+		Atu3088	0.41	-0.4
94,296	+		Atu3088	0.57	+1.0
94,342	-		Atu3088	0.60	+0.7
94,431	-		Atu3088	0.67	-0.6
94,498	-		Atu3088	0.72	+0.2
94,532	-		Atu3088	0.75	+0.4
94,540	-		Atu3088	0.76	-1.4
94,658	+		Atu3088	0.85	-0.2
94,666	-		Atu3088	0.85	-0.5
94,756	+				+0.0
94,761	+				-0.4
94,769	-				+0.3
94,769	-				+0.0
94,832	-				+0.4
95,126	-		Atu3089	0.22	+0.5
95,155	-		Atu3089	0.25	-0.2
95,378	+		Atu3089	0.45	+1.3
95,384	-		Atu3089	0.46	+1.0
95,431	+		Atu3089	0.50	+0.2
95,475	-		Atu3089	0.54	+0.3
95,497	-		Atu3089	0.56	-1.1
95,577	+		Atu3089	0.64	+1.1
95,629	-		Atu3089	0.69	-0.4
95,676	-		Atu3089	0.73	+0.6
95,722	+		Atu3089	0.77	-0.5
95,766	+		Atu3089	0.81	+0.4
95,818	+		Atu3089	0.86	+1.6
95,960	+				+0.3
95,968	-				-0.7
95,968	-				-0.4
96,203	+				+0.9
96,203	+				+0.4
96,222	-				-0.5
96,237	-				-0.3
96,429	+		Atu3090	0.24	+0.8
96,443	+		Atu3090	0.25	+1.3
96,443	+		Atu3090	0.25	-0.3
96,497	+		Atu3090	0.31	+0.0
96,544	+		Atu3090	0.35	-1.0
96,585	+		Atu3090	0.40	-0.8
96,615	-		Atu3090	0.43	-0.2
96,629	+		Atu3090	0.44	-0.1
96,637	-		Atu3090	0.45	-0.2
96,703	+		Atu3090	0.52	-0.6
96,777	-		Atu3090	0.59	+0.1
96,836	+		Atu3090	0.65	+0.2
96,880	+		Atu3090	0.70	+0.3