Strain Fitness in Agrobacterium fabrum C58 around Atu1100

Experiment: Acetovanillone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetovanillone 5 mM
1,088,774	+		Atu1099	0.42	+0.3
1,088,829	+		Atu1099	0.47	-0.1
1,088,853	-		Atu1099	0.49	+0.1
1,088,934	-		Atu1099	0.55	+0.0
1,088,939	-		Atu1099	0.56	+0.6
1,088,961	+		Atu1099	0.57	+1.2
1,089,352	-		Atu1099	0.89	-1.2
1,089,426	+				-0.1
1,089,583	+				-0.4
1,089,631	+				+0.2
1,089,671	+		Atu1100	0.14	-0.5
1,089,742	+		Atu1100	0.22	-0.3
1,089,750	-		Atu1100	0.23	-0.1
1,089,817	+		Atu1100	0.30	-0.4
1,089,932	-		Atu1100	0.43	-0.7
1,090,015	-		Atu1100	0.53	-0.2
1,090,054	-		Atu1100	0.57	-0.8
1,090,238	+		Atu1100	0.78	-0.8
1,090,251	-		Atu1100	0.79	-1.0
1,090,256	-		Atu1100	0.80	-1.3
1,090,269	-		Atu1100	0.81	-0.2
1,091,178	-		Atu1102	0.12	-0.2
1,091,368	-		Atu1102	0.42	+0.5
1,091,421	-		Atu1102	0.51	+0.1