Strain Fitness in Agrobacterium fabrum C58 around Atu0457

Experiment: Acetovanillone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetovanillone 5 mM
451,514	+		Atu8127	0.60	+1.5
451,514	+		Atu8127	0.60	+2.0
451,514	+		Atu8127	0.60	+1.4
451,514	+		Atu8127	0.60	+0.7
451,514	+		Atu8127	0.60	+1.5
451,514	+		Atu8127	0.60	+1.1
451,514	+		Atu8127	0.60	-1.1
451,522	-		Atu8127	0.60	+1.7
451,522	-		Atu8127	0.60	+1.5
451,522	-		Atu8127	0.60	+1.1
451,614	+		Atu8127	0.64	+1.6
451,661	+		Atu8127	0.67	+1.2
451,669	-		Atu8127	0.67	+1.6
451,748	-		Atu8127	0.70	+1.2
451,819	-		Atu8127	0.74	+0.7
451,819	-		Atu8127	0.74	+1.8
451,819	-		Atu8127	0.74	+1.2
451,847	-		Atu8127	0.75	+1.3
451,879	-		Atu8127	0.76	+0.9
451,879	-		Atu8127	0.76	+1.8
451,888	+		Atu8127	0.77	+1.1
451,896	+		Atu8127	0.77	+1.4
451,911	-		Atu8127	0.78	+1.5
451,960	-		Atu8127	0.80	+1.0
452,000	-		Atu8127	0.82	+1.3
452,002	+		Atu8127	0.82	+0.4
452,002	+		Atu8127	0.82	+1.8
452,010	-		Atu8127	0.82	+1.6
452,137	+		Atu8127	0.88	+0.9
452,164	+		Atu8127	0.89	+1.6
452,172	-		Atu8127	0.90	+1.5
452,173	+		Atu8127	0.90	+1.2
452,202	+				+1.5
452,223	+				+0.9
452,228	+				+0.2
452,231	-				+1.6
452,236	-				+1.7
452,242	+				+1.2
452,288	+				+0.7
452,289	-				+1.4
452,289	-				+1.5
452,312	-				+1.6
452,371	-				+1.4
452,615	+				+2.0
452,620	+				+1.6
452,620	+				+1.9
452,628	-				+1.2
452,628	-				+1.7
452,775	-		Atu0457	0.15	+1.5
452,775	-		Atu0457	0.15	+1.9
452,786	+		Atu0457	0.16	+1.4
452,852	+		Atu0457	0.20	+0.1
452,869	+		Atu0457	0.21	+1.2
452,921	-		Atu0457	0.24	+1.8
452,921	-		Atu0457	0.24	+1.1
452,946	+		Atu0457	0.25	+0.8
452,959	-		Atu0457	0.26	+2.0
453,049	+		Atu0457	0.31	+1.0
453,059	+		Atu0457	0.31	+1.2
453,114	+		Atu0457	0.35	+1.4
453,226	-		Atu0457	0.41	+1.5
453,484	+		Atu0457	0.56	+1.5
453,511	-		Atu0457	0.57	+2.0
453,584	+		Atu0457	0.62	+1.5
453,601	-		Atu0457	0.63	+1.7
453,601	-		Atu0457	0.63	+0.6
453,639	+		Atu0457	0.65	+0.8
453,811	+		Atu0457	0.75	+0.8
454,049	-		Atu0457	0.88	+1.3
454,087	-				+1.9
454,128	-				+1.8
454,234	-				+1.5
454,241	-				+1.3
454,251	+				+1.4
454,277	+				+1.4
454,277	-				+1.7
454,296	-		Atu0458	0.13	+1.7
454,296	-		Atu0458	0.13	+2.6
454,297	+		Atu0458	0.14	+1.0
454,315	-		Atu0458	0.18	+2.0
454,406	-		Atu0458	0.43	+2.0
454,412	-		Atu0458	0.45	+1.5
454,481	-		Atu0458	0.63	+1.7
454,534	-		Atu0458	0.78	+1.8
454,609	+				+1.2
454,609	+				+1.1
454,654	-				+1.7
454,654	-				+1.7
454,662	+				+1.4
454,702	-		Atu8128	0.11	+1.9
454,726	-		Atu8128	0.17	+0.5
454,737	+		Atu8128	0.19	+1.3
454,748	+		Atu8128	0.21	+1.7
454,775	-		Atu8128	0.27	+2.0
454,780	+		Atu8128	0.28	+1.0
454,780	+		Atu8128	0.28	+0.5
454,814	+		Atu8128	0.35	+1.0
454,856	-		Atu8128	0.45	+1.8
454,866	-		Atu8128	0.47	+1.8
454,875	-		Atu8128	0.49	+1.5
454,927	+		Atu8128	0.60	+1.6
454,953	-		Atu8128	0.65	+1.7
454,995	+		Atu8128	0.74	+1.3
455,001	-		Atu8128	0.76	+1.9
455,016	+		Atu8128	0.79	+1.2
455,085	+				+1.7
455,137	-				+0.8
455,139	+				+0.5
455,144	+		Atu0460	0.12	+1.2
455,147	-		Atu0460	0.14	+1.4
455,152	+		Atu0460	0.16	+0.9
455,205	+		Atu0460	0.41	+1.5
455,237	+		Atu0460	0.56	+1.8
455,242	+		Atu0460	0.58	+1.3