Experiment: Acetovanillone 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0453 and Atu0454 overlap by 1 nucleotides Atu0454 and Atu8126 are separated by 208 nucleotides Atu8126 and Atu8127 are separated by 12 nucleotides
Atu0453: Atu0453 - hypothetical protein, at 448,012 to 448,758
Atu0453
Atu0454: Atu0454 - hypothetical protein, at 448,758 to 449,309
Atu0454
Atu8126: Atu8126 - putative phage tail protein I, at 449,518 to 450,183
Atu8126
Atu8127: Atu8127 - hypothetical protein, at 450,196 to 452,397
Atu8127
Position (kb) 448
449
450 Strain fitness (log2 ratio) -1
0
1
2 at 447.760 kb on + strand at 447.772 kb on + strand at 447.850 kb on + strand at 447.859 kb on + strand at 447.874 kb on - strand at 447.931 kb on + strand at 447.978 kb on - strand at 448.009 kb on + strand at 448.017 kb on - strand at 448.038 kb on + strand at 448.046 kb on - strand at 448.064 kb on - strand at 448.113 kb on + strand, within Atu0453 at 448.118 kb on - strand, within Atu0453 at 448.157 kb on - strand, within Atu0453 at 448.164 kb on - strand, within Atu0453 at 448.199 kb on + strand, within Atu0453 at 448.199 kb on + strand, within Atu0453 at 448.370 kb on - strand, within Atu0453 at 448.376 kb on - strand, within Atu0453 at 448.381 kb on + strand, within Atu0453 at 448.381 kb on - strand, within Atu0453 at 448.478 kb on - strand, within Atu0453 at 448.522 kb on - strand, within Atu0453 at 448.548 kb on + strand, within Atu0453 at 448.661 kb on - strand, within Atu0453 at 448.716 kb on + strand at 448.738 kb on + strand at 448.746 kb on - strand at 448.747 kb on + strand at 448.781 kb on - strand at 448.880 kb on - strand, within Atu0454 at 448.882 kb on + strand, within Atu0454 at 448.890 kb on - strand, within Atu0454 at 448.891 kb on + strand, within Atu0454 at 448.900 kb on - strand, within Atu0454 at 448.905 kb on + strand, within Atu0454 at 448.923 kb on - strand, within Atu0454 at 448.973 kb on + strand, within Atu0454 at 448.973 kb on + strand, within Atu0454 at 448.973 kb on + strand, within Atu0454 at 448.981 kb on - strand, within Atu0454 at 448.981 kb on - strand, within Atu0454 at 449.227 kb on + strand, within Atu0454 at 449.288 kb on - strand at 449.294 kb on - strand at 449.342 kb on - strand at 449.457 kb on + strand at 449.472 kb on - strand at 449.525 kb on + strand at 449.525 kb on + strand at 449.533 kb on - strand at 449.533 kb on - strand at 449.606 kb on - strand, within Atu8126 at 449.622 kb on - strand, within Atu8126 at 449.622 kb on - strand, within Atu8126 at 449.622 kb on - strand, within Atu8126 at 449.775 kb on - strand, within Atu8126 at 449.868 kb on - strand, within Atu8126 at 449.920 kb on + strand, within Atu8126 at 449.930 kb on - strand, within Atu8126 at 449.975 kb on + strand, within Atu8126 at 450.109 kb on + strand, within Atu8126 at 450.110 kb on + strand, within Atu8126 at 450.177 kb on + strand at 450.179 kb on + strand at 450.180 kb on - strand at 450.191 kb on + strand at 450.192 kb on - strand at 450.272 kb on + strand at 450.308 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Acetovanillone 5 mM remove 447,760 + +1.2 447,772 + +1.3 447,850 + +1.2 447,859 + +1.0 447,874 - +2.4 447,931 + +1.1 447,978 - +1.5 448,009 + +1.4 448,017 - +1.1 448,038 + +0.9 448,046 - +1.6 448,064 - +0.8 448,113 + Atu0453 0.14 +1.0 448,118 - Atu0453 0.14 +1.8 448,157 - Atu0453 0.19 +1.2 448,164 - Atu0453 0.20 +1.5 448,199 + Atu0453 0.25 +0.9 448,199 + Atu0453 0.25 +1.7 448,370 - Atu0453 0.48 -0.6 448,376 - Atu0453 0.49 +1.4 448,381 + Atu0453 0.49 +1.0 448,381 - Atu0453 0.49 +1.1 448,478 - Atu0453 0.62 +1.5 448,522 - Atu0453 0.68 +1.7 448,548 + Atu0453 0.72 +1.4 448,661 - Atu0453 0.87 +1.7 448,716 + +1.3 448,738 + +1.2 448,746 - +1.6 448,747 + +1.0 448,781 - +1.2 448,880 - Atu0454 0.22 +1.5 448,882 + Atu0454 0.22 +1.2 448,890 - Atu0454 0.24 +1.5 448,891 + Atu0454 0.24 +1.5 448,900 - Atu0454 0.26 +1.3 448,905 + Atu0454 0.27 +0.9 448,923 - Atu0454 0.30 +1.8 448,973 + Atu0454 0.39 +1.0 448,973 + Atu0454 0.39 +0.2 448,973 + Atu0454 0.39 +0.1 448,981 - Atu0454 0.40 +1.0 448,981 - Atu0454 0.40 +1.1 449,227 + Atu0454 0.85 +1.1 449,288 - +1.6 449,294 - +1.4 449,342 - +1.2 449,457 + +0.3 449,472 - +1.8 449,525 + +1.0 449,525 + +1.2 449,533 - +1.8 449,533 - +1.6 449,606 - Atu8126 0.13 +1.2 449,622 - Atu8126 0.16 +1.5 449,622 - Atu8126 0.16 +0.9 449,622 - Atu8126 0.16 -0.1 449,775 - Atu8126 0.39 +1.2 449,868 - Atu8126 0.53 +1.3 449,920 + Atu8126 0.60 +1.1 449,930 - Atu8126 0.62 +0.3 449,975 + Atu8126 0.69 +1.0 450,109 + Atu8126 0.89 +1.4 450,110 + Atu8126 0.89 +1.2 450,177 + +1.4 450,179 + +1.3 450,180 - +1.5 450,191 + +1.1 450,192 - +0.9 450,272 + +1.1 450,308 + +0.8
Or see this region's nucleotide sequence