Strain Fitness in Agrobacterium fabrum C58 around Atu8156

Experiment: Acetovanillone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetovanillone 5 mM
1,359,987	+		Atu1364	0.65	-0.0
1,360,056	-		Atu1364	0.68	+0.8
1,360,137	+		Atu1364	0.71	+0.3
1,360,267	+		Atu1364	0.77	+0.1
1,360,377	+		Atu1364	0.81	+0.4
1,360,437	-		Atu1364	0.83	+0.1
1,360,742	+				-0.2
1,360,817	+				-0.3
1,360,817	+				+0.4
1,361,077	+		Atu8156	0.19	-0.3
1,361,160	-		Atu8156	0.30	-0.3
1,361,197	-		Atu8156	0.35	-1.0
1,361,257	+		Atu8156	0.43	-0.1
1,361,624	-				+1.4
1,361,825	-		Atu1366	0.39	-0.5
1,361,832	+		Atu1366	0.42	-0.1
1,361,850	-		Atu1366	0.47	+0.4
1,361,850	-		Atu1366	0.47	-0.3
1,361,850	-		Atu1366	0.47	+1.3
1,361,850	-		Atu1366	0.47	+1.2
1,361,850	-		Atu1366	0.47	-0.3
1,362,095	-				+1.3
1,362,223	+		Atu1367	0.21	+0.2
1,362,225	+		Atu1367	0.21	+0.8
1,362,238	-		Atu1367	0.22	+1.0
1,362,238	-		Atu1367	0.22	-0.3
1,362,291	+		Atu1367	0.28	-0.4
1,362,353	+		Atu1367	0.36	+0.2
1,362,376	+		Atu1367	0.38	-0.7
1,362,388	-		Atu1367	0.40	-0.3
1,362,397	+		Atu1367	0.41	+0.1
1,362,405	-		Atu1367	0.42	-0.5
1,362,417	-		Atu1367	0.43	+0.2
1,362,457	-		Atu1367	0.48	-0.3
1,362,499	+		Atu1367	0.52	+0.4
1,362,518	-		Atu1367	0.55	-0.5
1,362,551	+		Atu1367	0.58	+0.8
1,362,614	-		Atu1367	0.66	+0.7
1,362,680	-		Atu1367	0.73	+0.4