Strain Fitness in Agrobacterium fabrum C58 around Atu4754

Experiment: Acetovanillone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetovanillone 5 mM
1,921,952	+		Atu4752	0.64	-0.1
1,921,993	+		Atu4752	0.69	-0.1
1,922,019	-		Atu4752	0.72	-0.8
1,922,039	-		Atu4752	0.75	+1.2
1,922,039	-		Atu4752	0.75	+1.5
1,922,039	-		Atu4752	0.75	-0.1
1,922,039	-		Atu4752	0.75	-0.2
1,922,075	+		Atu4752	0.80	+0.9
1,922,275	+				-0.1
1,922,431	-		Atu4753	0.29	-0.2
1,922,444	-		Atu4753	0.31	+0.4
1,922,455	+		Atu4753	0.32	+1.6
1,922,501	-		Atu4753	0.39	+0.0
1,922,512	-		Atu4753	0.41	+0.6
1,922,520	+		Atu4753	0.42	-0.7
1,922,677	-		Atu4753	0.65	-0.1
1,922,846	-		Atu4753	0.89	-1.8
1,922,874	-				+0.2
1,922,925	-				-0.3
1,922,927	+				+0.1
1,923,037	-		Atu4754	0.15	-0.2
1,923,246	-		Atu4754	0.47	-0.3
1,923,254	+		Atu4754	0.48	-0.4
1,923,350	-		Atu4754	0.62	-0.5
1,923,357	+		Atu4754	0.63	-0.1
1,923,440	+		Atu4754	0.76	-0.0
1,923,440	+		Atu4754	0.76	-0.3
1,923,440	+		Atu4754	0.76	-1.1
1,923,440	+		Atu4754	0.76	-0.4
1,923,448	-		Atu4754	0.77	-1.0
1,923,448	-		Atu4754	0.77	-0.8
1,923,450	+		Atu4754	0.77	-0.7
1,923,505	+		Atu4754	0.86	+0.3
1,923,513	-		Atu4754	0.87	-1.8
1,923,616	-				+0.6
1,923,616	-				+0.1
1,923,787	+		Atu4755	0.15	+0.5
1,923,795	-		Atu4755	0.16	+0.1
1,923,795	-		Atu4755	0.16	-0.1
1,923,881	+		Atu4755	0.26	+0.2
1,923,909	-		Atu4755	0.29	-0.0
1,923,916	-		Atu4755	0.30	+0.2
1,923,916	-		Atu4755	0.30	-0.9
1,923,917	+		Atu4755	0.30	+0.2
1,923,961	+		Atu4755	0.35	-0.1
1,923,961	+		Atu4755	0.35	+0.0
1,923,969	-		Atu4755	0.36	+0.1
1,923,969	-		Atu4755	0.36	+0.6
1,923,969	-		Atu4755	0.36	+1.0
1,924,386	+		Atu4755	0.85	-1.3
1,924,394	-		Atu4755	0.86	-0.2
1,924,408	+		Atu4755	0.88	+0.3
1,924,408	+		Atu4755	0.88	+0.1
1,924,416	-		Atu4755	0.89	-1.3
1,924,416	-		Atu4755	0.89	-0.3
1,924,431	+				+0.1
1,924,431	+				+0.0
1,924,439	-				-0.3
1,924,463	-				+3.2
1,924,473	+				+0.3
1,924,514	+				-0.0
1,924,574	+				-0.6
1,924,584	-				-0.3