Strain Fitness in Agrobacterium fabrum C58 around Atu5101

Experiment: Rosmarinic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rosmarinic 5 mM
107,001	+		Atu5100	0.72	-0.0
107,001	+		Atu5100	0.72	-0.6
107,001	+		Atu5100	0.72	-0.6
107,009	-		Atu5100	0.73	-0.0
107,047	+		Atu5100	0.74	-0.3
107,055	-		Atu5100	0.74	-0.9
107,210	-		Atu5100	0.79	-0.3
107,224	-		Atu5100	0.79	+0.5
107,293	+		Atu5100	0.81	+0.2
107,333	-		Atu5100	0.83	+0.1
107,378	+		Atu5100	0.84	+0.1
107,444	-		Atu5100	0.86	+0.1
107,448	+		Atu5100	0.86	-0.0
107,482	+		Atu5100	0.87	+0.5
107,482	+		Atu5100	0.87	-0.1
107,482	+		Atu5100	0.87	+0.6
107,490	-		Atu5100	0.87	-0.7
107,490	-		Atu5100	0.87	+0.2
107,490	-		Atu5100	0.87	+0.4
107,490	-		Atu5100	0.87	+0.3
107,525	-		Atu5100	0.88	-0.1
107,527	+		Atu5100	0.88	+0.3
107,543	-		Atu5100	0.89	-0.1
107,550	-		Atu5100	0.89	+0.6
107,608	+				-0.2
107,616	-				+0.3
107,631	-				-0.5
107,678	-				-0.2
107,756	-				-0.1
107,826	-				+0.5
107,845	+				-1.0
107,845	+				-0.3
107,845	+				+0.5
107,914	+				-0.1
107,972	+				+0.4
107,972	+				-0.2
108,044	-		Atu5101	0.18	+0.2
108,047	+		Atu5101	0.19	+0.6
108,059	+		Atu5101	0.23	+0.2
108,062	+		Atu5101	0.24	+1.1
108,064	+		Atu5101	0.25	-0.3
108,088	+		Atu5101	0.33	-0.2
108,098	+		Atu5101	0.36	+0.4
108,106	-		Atu5101	0.39	+0.7
108,131	+		Atu5101	0.48	+1.0
108,217	-		Atu5101	0.78	+0.3
108,319	+				-1.0
108,362	+				+0.2
108,439	-				+0.3
108,465	+				-0.4
108,491	-				-0.1
108,491	-				+0.6
108,520	+				+0.3
108,544	+				+0.5
108,576	+				+0.1
108,576	+				+0.7
108,584	-				+1.1
108,584	-				-0.5
108,596	-				-0.8
108,599	-				-0.3
108,599	-				-0.9
108,679	-				-0.9
108,679	-				+0.0
108,785	+				-0.0
108,801	+				+0.3
108,801	+				+0.2
108,809	-				+0.2
108,850	-				-0.2
108,885	+				+0.0
109,102	+		Atu5102	0.34	-2.0
109,110	+		Atu5102	0.35	-0.1
109,114	+		Atu5102	0.36	-0.4
109,185	-		Atu5102	0.48	+0.3
109,199	+		Atu5102	0.50	-0.2
109,244	-		Atu5102	0.58	-1.0