Strain Fitness in Agrobacterium fabrum C58 around Atu2380

Experiment: Rosmarinic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rosmarinic 5 mM
2,351,827	+		Atu2379	0.44	-0.3
2,351,835	-		Atu2379	0.44	+0.6
2,351,892	+		Atu2379	0.48	+0.4
2,351,909	-		Atu2379	0.50	+0.9
2,352,028	+		Atu2379	0.58	+1.0
2,352,073	+		Atu2379	0.61	-0.9
2,352,081	-		Atu2379	0.62	+0.5
2,352,105	+		Atu2379	0.63	+0.2
2,352,139	-		Atu2379	0.66	-0.2
2,352,192	+		Atu2379	0.69	-0.6
2,352,212	+		Atu2379	0.71	-1.2
2,352,275	+		Atu2379	0.75	+0.5
2,352,424	-		Atu2379	0.86	+0.3
2,352,471	-		Atu2379	0.89	+0.3
2,352,569	-				+0.5
2,352,569	-				+0.6
2,352,595	+				-0.0
2,352,744	-				-1.5
2,352,760	+				+0.1
2,352,761	+				+0.2
2,352,769	-				+1.5
2,352,782	-				-0.0
2,352,790	+				+0.1
2,352,872	+		Atu2380	0.24	+0.2
2,353,171	+				+0.4
2,353,172	+				+0.0
2,353,172	+				-0.4
2,353,172	+				-0.2
2,353,172	+				-0.6
2,353,172	-				+0.7
2,353,180	-				-0.6
2,353,197	+				+0.3
2,353,205	-				-0.2
2,353,275	+		Atu2381	0.27	+0.5
2,353,275	+		Atu2381	0.27	+0.2
2,353,275	+		Atu2381	0.27	-0.0
2,353,283	-		Atu2381	0.30	-0.1
2,353,283	-		Atu2381	0.30	+1.0
2,353,283	-		Atu2381	0.30	-0.3
2,353,453	+		Atu2381	0.76	+0.4
2,353,474	-		Atu2381	0.82	+0.4
2,353,494	+		Atu2381	0.87	-1.0
2,353,545	-				+0.8
2,353,594	-		Atu2382	0.16	+0.1
2,353,616	+		Atu2382	0.24	-0.3
2,353,735	+		Atu2382	0.65	-0.0
2,353,743	-		Atu2382	0.67	-0.2
2,353,781	+		Atu2382	0.80	-0.0
2,353,874	+		Atu2383	0.13	-0.3
2,354,112	-		Atu2383	0.69	+1.0