Strain Fitness in Agrobacterium fabrum C58 around Atu2144

Experiment: Rosmarinic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rosmarinic 5 mM
2,108,639	-		Atu2143	0.55	-0.1
2,108,688	+		Atu2143	0.58	-0.6
2,108,911	+		Atu2143	0.73	+0.0
2,109,023	+		Atu2143	0.80	-0.3
2,109,031	-		Atu2143	0.81	+0.0
2,109,052	-		Atu2143	0.82	+0.2
2,109,052	-		Atu2143	0.82	+0.3
2,109,052	-		Atu2143	0.82	+0.2
2,109,052	-		Atu2143	0.82	-0.4
2,109,208	+				+0.6
2,109,293	-				+0.0
2,109,315	+				+0.7
2,109,315	-				+0.3
2,109,325	-				+0.2
2,109,325	-				+1.5
2,109,393	-				-0.0
2,109,414	+				+0.2
2,109,429	+				+0.1
2,109,431	+				+0.3
2,109,437	-				-0.3
2,109,524	+				-0.6
2,109,581	-				+0.1
2,109,700	+		Atu2144	0.20	+0.9
2,109,700	-		Atu2144	0.20	+0.1
2,109,732	-		Atu2144	0.24	+0.3
2,109,838	+		Atu2144	0.38	+0.1
2,109,865	+		Atu2144	0.41	+0.4
2,110,057	+		Atu2144	0.66	+0.1
2,110,058	-		Atu2144	0.66	-0.0
2,110,137	+		Atu2144	0.76	+1.2
2,110,543	+				+0.2
2,110,613	+		Atu2145	0.14	-0.2
2,110,689	+		Atu2145	0.22	+1.9
2,110,756	+		Atu2145	0.30	+0.4
2,110,764	-		Atu2145	0.31	+0.8
2,110,781	+		Atu2145	0.33	+0.3
2,110,794	-		Atu2145	0.34	+0.2
2,110,857	-		Atu2145	0.42	-0.1
2,111,091	-		Atu2145	0.68	+0.3
2,111,118	+		Atu2145	0.71	+0.3
2,111,118	+		Atu2145	0.71	-0.1
2,111,157	-		Atu2145	0.76	-0.1
2,111,159	-		Atu2145	0.76	-0.2
2,111,189	+		Atu2145	0.79	-0.3
2,111,197	-		Atu2145	0.80	+0.2
2,111,210	-		Atu2145	0.82	+0.4
2,111,247	-		Atu2145	0.86	+0.7
2,111,252	-		Atu2145	0.86	-0.1
2,111,257	+		Atu2145	0.87	-0.3
2,111,262	+		Atu2145	0.88	+0.5
2,111,272	+		Atu2145	0.89	-0.1
2,111,277	+		Atu2145	0.89	+0.5
2,111,280	-		Atu2145	0.90	+0.5