Strain Fitness in Agrobacterium fabrum C58 around Atu1863

Experiment: Rosmarinic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rosmarinic 5 mM
1,843,301	+				-0.0
1,843,313	+				-0.5
1,843,412	-				-1.3
1,843,425	+				+0.1
1,843,430	+				+0.0
1,843,433	-				+0.0
1,843,433	-				+0.1
1,843,433	-				-1.2
1,843,433	-				+0.1
1,843,433	-				+0.4
1,843,548	+		Atu1863	0.14	+0.3
1,843,644	-		Atu1863	0.25	+0.2
1,843,661	-		Atu1863	0.27	-0.9
1,843,683	-		Atu1863	0.29	+0.9
1,843,733	+		Atu1863	0.35	+1.3
1,843,860	+		Atu1863	0.49	+0.3
1,843,868	-		Atu1863	0.50	+0.5
1,843,906	+		Atu1863	0.54	-0.4
1,844,014	+		Atu1863	0.66	+0.2
1,844,130	-		Atu1863	0.79	+0.4
1,844,371	+				+0.1
1,844,425	+		Atu1864	0.11	-0.9
1,844,442	+		Atu1864	0.14	-0.5
1,844,442	-		Atu1864	0.14	+0.0
1,844,476	+		Atu1864	0.19	+1.0
1,844,638	+		Atu1864	0.45	-0.2
1,845,007	+				+0.1
1,845,010	-				-0.3
1,845,067	+				+0.0
1,845,152	-				+1.0
1,845,152	-				+0.1
1,845,154	+				-1.1
1,845,176	+				-0.2
1,845,184	-		Atu1865	0.12	+0.4
1,845,184	-		Atu1865	0.12	-0.3
1,845,184	-		Atu1865	0.12	-0.7
1,845,184	-		Atu1865	0.12	+0.4
1,845,273	+		Atu1865	0.49	+0.5