Strain Fitness in Agrobacterium fabrum C58 around Atu1608

Experiment: Rosmarinic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rosmarinic 5 mM
1,588,798	+				+0.3
1,588,806	-				+0.1
1,588,806	-				-0.2
1,588,825	+				+0.0
1,588,832	+				+0.2
1,588,857	+				+1.9
1,588,994	-		Atu1607	0.25	+0.2
1,589,124	-		Atu1607	0.40	+0.2
1,589,200	-		Atu1607	0.49	+0.0
1,589,210	+		Atu1607	0.51	-0.2
1,589,314	+		Atu1607	0.63	+0.5
1,589,427	-		Atu1607	0.76	+0.3
1,589,552	+				-0.0
1,589,558	-				+0.1
1,589,758	+				+0.1
1,589,773	-				-0.4
1,590,061	-		Atu1608	0.70	+0.5
1,590,081	+		Atu1608	0.75	+0.4
1,590,117	+		Atu1608	0.84	-0.1
1,590,125	-		Atu1608	0.86	+0.3
1,590,127	-		Atu1608	0.86	-0.1
1,590,132	-		Atu1608	0.87	+0.6
1,590,132	-		Atu1608	0.87	+0.1
1,590,314	-				-1.1
1,590,516	+		Atu1609	0.19	-0.0
1,590,539	-		Atu1609	0.20	-0.0
1,590,623	+		Atu1609	0.25	+0.1
1,590,631	-		Atu1609	0.26	-0.0
1,590,757	+		Atu1609	0.33	-0.1
1,590,976	-		Atu1609	0.45	-0.2
1,591,139	-		Atu1609	0.55	+0.5