Strain Fitness in Agrobacterium fabrum C58 around Atu1098
Experiment: Rosmarinic 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Rosmarinic 5 mM |
---|---|---|---|---|---|
remove | |||||
1,087,996 | - | Atu1098 | 0.23 | -0.1 | |
1,088,149 | + | Atu1098 | 0.72 | +1.1 | |
1,088,311 | + | +1.0 | |||
1,088,416 | + | Atu1099 | 0.13 | -0.2 | |
1,088,464 | + | Atu1099 | 0.17 | -0.4 | |
1,088,501 | + | Atu1099 | 0.20 | +1.1 | |
1,088,774 | + | Atu1099 | 0.42 | -0.3 | |
1,088,829 | + | Atu1099 | 0.47 | +0.3 | |
1,088,853 | - | Atu1099 | 0.49 | +0.1 | |
1,088,934 | - | Atu1099 | 0.55 | +0.6 | |
1,088,939 | - | Atu1099 | 0.56 | -0.5 | |
1,088,961 | + | Atu1099 | 0.57 | -0.6 |
Or see this region's nucleotide sequence