Strain Fitness in Agrobacterium fabrum C58 around Atu1070

Experiment: Rosmarinic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rosmarinic 5 mM
1,062,032	+				+0.2
1,062,086	-		Atu1069	0.12	+0.9
1,062,091	-		Atu1069	0.12	-0.0
1,062,097	+		Atu1069	0.13	+0.0
1,062,119	+		Atu1069	0.15	+0.1
1,062,255	+		Atu1069	0.29	+0.0
1,062,327	+		Atu1069	0.37	-0.3
1,062,496	-		Atu1069	0.54	+0.2
1,062,496	-		Atu1069	0.54	+0.3
1,062,510	+		Atu1069	0.56	-0.4
1,062,518	-		Atu1069	0.57	-1.0
1,062,526	+		Atu1069	0.58	-0.2
1,062,669	+		Atu1069	0.73	+0.0
1,062,677	-		Atu1069	0.73	+0.2
1,062,740	-		Atu1069	0.80	-0.1
1,062,774	-		Atu1069	0.83	-0.0
1,062,846	-				-0.3
1,062,912	-				-0.0
1,062,927	-				-0.6
1,062,990	-		Atu1070	0.12	+0.7
1,063,013	+		Atu1070	0.17	-0.6
1,063,032	+		Atu1070	0.21	+0.4
1,063,034	-		Atu1070	0.22	+0.1
1,063,096	+		Atu1070	0.35	-0.2
1,063,104	-		Atu1070	0.37	+1.4
1,063,144	+		Atu1070	0.46	+0.8
1,063,154	+		Atu1070	0.48	+0.3
1,063,211	-		Atu1070	0.60	-0.5
1,063,213	+		Atu1070	0.61	+0.6
1,063,469	+		Atu1071	0.16	-0.2
1,063,473	+		Atu1071	0.17	-0.6
1,063,507	+		Atu1071	0.24	-0.4
1,063,515	-		Atu1071	0.26	-0.2
1,063,627	+		Atu1071	0.49	+0.4
1,063,635	-		Atu1071	0.51	-0.1
1,063,783	+		Atu1071	0.82	+0.4
1,063,798	+		Atu1071	0.85	+0.3
1,063,798	+		Atu1071	0.85	+0.1
1,063,852	+				-0.6
1,063,909	+		Atu1072	0.12	-0.0
1,063,954	+		Atu1072	0.25	-0.2
1,063,954	+		Atu1072	0.25	-0.6
1,063,962	+		Atu1072	0.27	+0.1
1,064,026	+		Atu1072	0.44	-0.3
1,064,166	+		Atu1072	0.82	+0.5
1,064,209	+				+0.7
1,064,210	-				+0.6
1,064,210	-				-0.0
1,064,223	-				+0.4
1,064,226	+				-0.4
1,064,234	-				+0.5
1,064,324	-				+0.3
1,064,324	-				+1.0
1,064,369	+				-0.7