Strain Fitness in Agrobacterium fabrum C58 around Atu4632

Experiment: Rosmarinic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rosmarinic 5 mM
1,780,598	+		Atu4630	0.84	-0.1
1,780,606	-		Atu4630	0.87	+0.6
1,780,623	+				-0.1
1,780,623	+				-0.3
1,780,623	+				-0.7
1,780,623	+				-0.2
1,780,631	-				-0.4
1,780,631	-				-0.2
1,780,753	+		Atu4631	0.14	-1.3
1,780,828	+		Atu4631	0.23	+0.6
1,780,828	+		Atu4631	0.23	+0.8
1,780,828	+		Atu4631	0.23	-0.3
1,780,831	-		Atu4631	0.23	+0.0
1,780,836	-		Atu4631	0.24	+0.6
1,780,836	-		Atu4631	0.24	-0.3
1,780,965	-		Atu4631	0.39	-1.0
1,781,051	+		Atu4631	0.49	+1.0
1,781,096	+		Atu4631	0.55	-0.1
1,781,104	-		Atu4631	0.56	-0.2
1,781,299	+		Atu4631	0.79	-0.2
1,781,370	-		Atu4631	0.88	+0.6
1,781,380	+		Atu4631	0.89	+0.0
1,781,390	-				+0.6
1,781,527	+				+0.4
1,781,604	+				-0.5
1,781,688	-				-0.4
1,781,704	-				-0.3
1,781,902	+		Atu4632	0.18	+0.2
1,781,909	-		Atu4632	0.19	+0.2
1,782,020	+		Atu4632	0.23	-0.8
1,782,121	+		Atu4632	0.28	-0.1
1,782,121	+		Atu4632	0.28	+0.1
1,782,121	+		Atu4632	0.28	+0.9
1,782,121	+		Atu4632	0.28	-0.5
1,782,129	-		Atu4632	0.28	+0.5
1,782,129	-		Atu4632	0.28	+0.3
1,782,129	-		Atu4632	0.28	-0.4
1,782,129	-		Atu4632	0.28	-0.4
1,782,161	-		Atu4632	0.30	-0.5
1,782,290	+		Atu4632	0.35	-0.3
1,782,298	-		Atu4632	0.35	-0.7
1,782,359	+		Atu4632	0.38	-0.2
1,782,428	+		Atu4632	0.41	-1.0
1,782,794	-		Atu4632	0.57	-1.8
1,782,898	+		Atu4632	0.61	-0.7
1,783,032	-		Atu4632	0.67	-0.3
1,783,060	+		Atu4632	0.68	-0.4
1,783,060	+		Atu4632	0.68	+0.1
1,783,080	-		Atu4632	0.69	-0.5
1,783,080	-		Atu4632	0.69	+0.2
1,783,173	-		Atu4632	0.73	-0.5
1,783,198	+		Atu4632	0.74	+0.0
1,783,198	+		Atu4632	0.74	-0.2
1,783,262	+		Atu4632	0.77	+0.0
1,783,262	-		Atu4632	0.77	-0.8
1,783,350	-		Atu4632	0.81	-0.2
1,783,366	-		Atu4632	0.82	-0.0
1,783,390	+		Atu4632	0.83	-0.4
1,783,394	-		Atu4632	0.83	+0.1
1,783,590	+				-0.5
1,783,650	-				-0.6
1,783,678	+				+0.3
1,783,763	+				-0.4
1,783,809	-		Atu4633	0.11	-0.1
1,783,921	+		Atu4633	0.30	-0.4
1,783,929	-		Atu4633	0.32	-0.3
1,783,939	-		Atu4633	0.33	+0.4
1,784,034	+		Atu4633	0.49	-0.4
1,784,061	+		Atu4633	0.54	+0.5
1,784,135	+		Atu4633	0.67	-0.2
1,784,169	+		Atu4633	0.72	-0.7
1,784,287	-				+0.3
1,784,302	-				-0.0
1,784,312	+				-0.3
1,784,374	+				-0.4
1,784,432	+		Atu4634	0.16	-0.0
1,784,517	-		Atu4634	0.29	-0.1
1,784,519	+		Atu4634	0.29	-0.1
1,784,667	-		Atu4634	0.52	+0.1
1,784,675	+		Atu4634	0.53	+0.3
1,784,684	-		Atu4634	0.55	-0.1
1,784,720	-		Atu4634	0.60	-0.6