Strain Fitness in Agrobacterium fabrum C58 around Atu8025

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
2,154,156	+				+1.2
2,154,171	+				-0.2
2,154,214	-				+1.7
2,154,233	+				-0.3
2,154,448	-		Atu8025	0.41	+0.5
2,154,471	-		Atu8025	0.53	+0.1
2,154,591	+				+0.3
2,154,686	+				+0.0
2,154,935	+		Atu2179	0.29	+0.0
2,154,935	+		Atu2179	0.29	-0.4
2,154,987	-		Atu2179	0.34	+0.1
2,155,077	+		Atu2179	0.41	-0.1
2,155,124	-		Atu2179	0.46	-0.1
2,155,159	-		Atu2179	0.49	-0.3
2,155,337	+		Atu2179	0.64	+1.6
2,155,345	-		Atu2179	0.65	+0.0
2,155,394	+		Atu2179	0.69	+0.5
2,155,431	-		Atu2179	0.72	-0.1
2,155,486	+		Atu2179	0.77	-0.0
2,155,486	+		Atu2179	0.77	-0.3
2,155,491	+		Atu2179	0.78	-0.1
2,155,491	+		Atu2179	0.78	-0.1
2,155,491	+		Atu2179	0.78	+0.7
2,155,494	-		Atu2179	0.78	-0.6
2,155,499	-		Atu2179	0.78	+0.6