Strain Fitness in Agrobacterium fabrum C58 around Atu4887

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
2,064,047	+		Atu4884	0.71	+0.1
2,064,047	+		Atu4884	0.71	-0.9
2,064,103	+		Atu4884	0.83	-0.5
2,064,139	+				-0.5
2,064,139	+				-0.7
2,064,139	+				-1.1
2,064,157	-				+0.2
2,064,170	+				-0.4
2,064,376	-				-0.4
2,064,403	+				-1.2
2,064,586	-		Atu8201	0.64	-1.7
2,064,586	-		Atu8201	0.64	-1.0
2,064,691	+		Atu8202	0.15	-0.2
2,064,691	+		Atu8202	0.15	-0.9
2,064,699	-		Atu8202	0.18	-0.2
2,064,699	-		Atu8202	0.18	+0.5
2,064,699	-		Atu8202	0.18	+0.9
2,064,699	-		Atu8202	0.18	+0.0
2,064,758	+		Atu8202	0.41	-1.9
2,064,780	+		Atu8202	0.49	-0.3
2,064,997	+		Atu4887	0.14	-0.5
2,065,002	+		Atu4887	0.15	+0.1
2,065,002	+		Atu4887	0.15	-1.5
2,065,010	-		Atu4887	0.17	-0.8
2,065,010	-		Atu4887	0.17	-0.2
2,065,110	+		Atu4887	0.46	+0.4
2,065,225	+		Atu4887	0.79	-1.3
2,065,291	-				-1.3
2,065,426	-				-0.1
2,065,475	+		Atu4888	0.13	-0.3
2,065,483	-		Atu4888	0.16	+0.1
2,065,483	-		Atu4888	0.16	-0.3
2,065,516	+		Atu4888	0.27	-0.3
2,065,524	-		Atu4888	0.30	-0.5
2,065,637	+		Atu4888	0.69	-0.7
2,065,669	+		Atu4888	0.80	-1.0
2,065,760	-				-1.5
2,065,762	+				-1.9
2,065,787	+				-0.3
2,065,808	+				-2.1
2,065,816	-				-0.9
2,065,826	+				+0.2
2,065,899	-		Atu4889	0.13	+0.8
2,065,944	+		Atu4889	0.18	-1.1
2,065,977	-		Atu4889	0.22	-0.5
2,065,994	+		Atu4889	0.25	+0.3
2,066,015	+		Atu4889	0.27	+0.4
2,066,071	-		Atu4889	0.34	-0.6
2,066,224	+		Atu4889	0.53	-0.2