Strain Fitness in Agrobacterium fabrum C58 around Atu4349

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
1,483,048	+		Atu4348	0.63	+0.4
1,483,096	+		Atu4348	0.65	-0.4
1,483,101	+		Atu4348	0.66	+0.6
1,483,147	+		Atu4348	0.67	-0.5
1,483,191	+		Atu4348	0.69	+0.8
1,483,315	-		Atu4348	0.74	+0.3
1,483,332	-		Atu4348	0.75	+0.1
1,483,536	-		Atu4348	0.83	-0.7
1,483,644	+		Atu4348	0.88	+0.3
1,483,960	+				+0.2
1,483,961	+				-0.5
1,483,982	-				-0.1
1,484,037	-				-0.1
1,484,194	+		Atu4349	0.26	+1.4
1,484,290	-		Atu4349	0.36	+0.9
1,484,293	+		Atu4349	0.36	+0.6
1,484,332	+		Atu4349	0.40	+0.2
1,484,588	+		Atu4349	0.67	-0.1
1,484,603	-		Atu4349	0.68	+0.2
1,484,669	-		Atu4349	0.75	+0.2
1,484,711	-		Atu4349	0.80	-0.8
1,484,738	+		Atu4349	0.83	+0.0
1,484,919	-				-0.6
1,485,004	-		Atu4350	0.12	-0.1
1,485,019	-		Atu4350	0.14	-0.4
1,485,053	-		Atu4350	0.18	+0.1
1,485,142	-		Atu4350	0.29	-1.0
1,485,142	-		Atu4350	0.29	+0.4
1,485,212	+		Atu4350	0.37	+0.1
1,485,220	-		Atu4350	0.38	-0.2
1,485,260	+		Atu4350	0.43	+0.1
1,485,297	+		Atu4350	0.47	+0.3
1,485,473	-		Atu4350	0.68	-0.2