Strain Fitness in Agrobacterium fabrum C58 around Atu3796

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
890,613	-		Atu3795	0.76	+1.4
890,667	+		Atu3795	0.78	+1.4
890,712	+		Atu3795	0.80	+1.4
890,776	+		Atu3795	0.82	+1.3
890,878	+		Atu3795	0.85	+1.6
890,900	+		Atu3795	0.86	+0.9
890,908	-		Atu3795	0.86	+1.3
890,908	-		Atu3795	0.86	+1.1
890,908	-		Atu3795	0.86	+1.3
890,921	-		Atu3795	0.86	+1.0
890,978	+		Atu3795	0.88	+1.3
890,981	-		Atu3795	0.88	+1.1
891,061	+				+0.6
891,075	+				+1.4
891,077	-				+1.4
891,079	+				+1.5
891,087	-				+0.9
891,087	-				+0.5
891,110	-				+2.5
891,145	+				+1.7
891,191	+				+1.2
891,194	-				+1.3
891,196	+				+0.9
891,199	-				+1.6
891,274	-				+1.2
891,292	-				+0.3
891,359	+				+1.3
891,378	+				+1.0
891,378	+				+1.2
891,378	+				+1.6
891,385	+				+1.2
891,446	+		Atu3796	0.10	+1.4
891,503	-		Atu3796	0.15	+1.2
891,629	-		Atu3796	0.27	+1.2
891,716	-		Atu3796	0.35	+0.6
891,758	-		Atu3796	0.39	+1.3
891,798	+		Atu3796	0.42	+1.2
891,807	-		Atu3796	0.43	+2.1
891,827	-		Atu3796	0.45	+1.5
891,901	+		Atu3796	0.52	+1.4
891,921	+		Atu3796	0.54	+0.6
891,928	+		Atu3796	0.54	+1.5
891,959	+		Atu3796	0.57	+1.1
892,002	+		Atu3796	0.61	+1.0
892,005	-		Atu3796	0.62	+2.1
892,055	+		Atu3796	0.66	+1.0
892,055	+		Atu3796	0.66	+1.4
892,063	-		Atu3796	0.67	+1.4
892,073	-		Atu3796	0.68	+1.3
892,073	-		Atu3796	0.68	+0.9
892,186	-		Atu3796	0.78	+3.1
892,255	-		Atu3796	0.85	+1.2
892,258	+		Atu3796	0.85	+1.0
892,300	-		Atu3796	0.89	+1.0
892,408	+				+1.3
892,509	-				+1.2
892,514	+				+0.7
892,517	-				+0.1
892,556	+		Atu3797	0.12	+0.6
892,559	-		Atu3797	0.13	+1.2
892,635	-		Atu3797	0.20	+1.8
892,729	+		Atu3797	0.29	+2.0
892,729	+		Atu3797	0.29	+1.2
892,729	+		Atu3797	0.29	+0.8
892,737	-		Atu3797	0.29	+1.3
892,737	-		Atu3797	0.29	+1.6
892,747	+		Atu3797	0.30	+1.1
892,782	+		Atu3797	0.33	+1.2
892,995	-		Atu3797	0.53	+0.4
892,999	+		Atu3797	0.54	+1.6
892,999	+		Atu3797	0.54	-0.5
892,999	+		Atu3797	0.54	+1.3
892,999	+		Atu3797	0.54	-0.5
892,999	+		Atu3797	0.54	+1.3
892,999	+		Atu3797	0.54	+1.2
893,007	-		Atu3797	0.54	+1.1
893,007	-		Atu3797	0.54	+1.1
893,007	-		Atu3797	0.54	+1.0
893,007	-		Atu3797	0.54	+2.5
893,007	-		Atu3797	0.54	+1.8
893,007	-		Atu3797	0.54	+1.3
893,007	-		Atu3797	0.54	+1.2
893,034	+		Atu3797	0.57	+1.9
893,042	-		Atu3797	0.58	+0.6
893,042	-		Atu3797	0.58	+1.1
893,098	-		Atu3797	0.63	+1.8
893,116	+		Atu3797	0.64	+1.2
893,313	+		Atu3797	0.83	+0.8
893,313	+		Atu3797	0.83	+0.3
893,331	-		Atu3797	0.84	+2.8
893,394	+				+1.1