Experiment: methyl jasmonate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3123 and Atu3124 are separated by 36 nucleotides Atu3124 and Atu3126 are separated by 738 nucleotides Atu3126 and Atu3127 are separated by 391 nucleotides
Atu3123: Atu3123 - 30S ribosomal protein S21, at 131,830 to 132,066
Atu3123
Atu3124: Atu3124 - hypothetical protein, at 132,103 to 132,318
Atu3124
Atu3126: Atu3126 - hypothetical protein, at 133,057 to 133,344
Atu3126
Atu3127: Atu3127 - acetyltransferase, at 133,736 to 134,833
Atu3127
Position (kb) 133
134 Strain fitness (log2 ratio) -1
0
1 at 132.100 kb on + strand at 132.143 kb on + strand, within Atu3124 at 132.153 kb on + strand, within Atu3124 at 132.219 kb on + strand, within Atu3124 at 132.233 kb on + strand, within Atu3124 at 132.584 kb on + strand at 132.610 kb on - strand at 132.689 kb on - strand at 132.689 kb on - strand at 132.781 kb on + strand at 132.876 kb on - strand at 132.897 kb on - strand at 132.931 kb on + strand at 132.987 kb on + strand at 133.040 kb on + strand at 133.107 kb on + strand, within Atu3126 at 133.126 kb on + strand, within Atu3126 at 133.148 kb on + strand, within Atu3126 at 133.148 kb on + strand, within Atu3126 at 133.178 kb on - strand, within Atu3126 at 133.289 kb on - strand, within Atu3126 at 133.323 kb on - strand at 133.323 kb on - strand at 133.325 kb on + strand at 133.445 kb on - strand at 133.471 kb on + strand at 133.479 kb on - strand at 133.528 kb on + strand at 133.530 kb on - strand at 133.541 kb on - strand at 133.625 kb on - strand at 133.675 kb on + strand at 133.733 kb on + strand at 133.937 kb on + strand, within Atu3127 at 133.970 kb on + strand, within Atu3127 at 133.970 kb on + strand, within Atu3127 at 133.978 kb on - strand, within Atu3127 at 134.004 kb on + strand, within Atu3127 at 134.026 kb on + strand, within Atu3127 at 134.052 kb on - strand, within Atu3127 at 134.052 kb on - strand, within Atu3127 at 134.092 kb on + strand, within Atu3127 at 134.103 kb on + strand, within Atu3127 at 134.116 kb on - strand, within Atu3127 at 134.139 kb on + strand, within Atu3127 at 134.237 kb on + strand, within Atu3127
Per-strain Table
Position Strand Gene LocusTag Fraction methyl jasmonate 5 mM remove 132,100 + -0.3 132,143 + Atu3124 0.19 -0.6 132,153 + Atu3124 0.23 +0.2 132,219 + Atu3124 0.54 -0.2 132,233 + Atu3124 0.60 +0.2 132,584 + -0.0 132,610 - +0.9 132,689 - -1.3 132,689 - +0.3 132,781 + +0.2 132,876 - -1.0 132,897 - +0.3 132,931 + +0.0 132,987 + +0.4 133,040 + -0.3 133,107 + Atu3126 0.17 +0.3 133,126 + Atu3126 0.24 -0.6 133,148 + Atu3126 0.32 +0.6 133,148 + Atu3126 0.32 -0.9 133,178 - Atu3126 0.42 +0.8 133,289 - Atu3126 0.81 +0.2 133,323 - -0.5 133,323 - +0.0 133,325 + +0.3 133,445 - -0.1 133,471 + -0.0 133,479 - +0.2 133,528 + -0.6 133,530 - +0.3 133,541 - +0.5 133,625 - -0.0 133,675 + -0.4 133,733 + +0.1 133,937 + Atu3127 0.18 -0.7 133,970 + Atu3127 0.21 +0.7 133,970 + Atu3127 0.21 -0.9 133,978 - Atu3127 0.22 -0.3 134,004 + Atu3127 0.24 +0.1 134,026 + Atu3127 0.26 -0.5 134,052 - Atu3127 0.29 -0.9 134,052 - Atu3127 0.29 -0.2 134,092 + Atu3127 0.32 -0.0 134,103 + Atu3127 0.33 -0.7 134,116 - Atu3127 0.35 -1.6 134,139 + Atu3127 0.37 -1.5 134,237 + Atu3127 0.46 +0.8
Or see this region's nucleotide sequence