Strain Fitness in Agrobacterium fabrum C58 around Atu3102

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
108,187	-				-0.2
108,215	+				-0.0
108,220	-				+1.0
108,232	-				+0.7
108,381	-		Atu3101	0.19	-0.1
108,392	+		Atu3101	0.20	-0.5
108,400	-		Atu3101	0.21	-0.7
108,445	-		Atu3101	0.26	-0.2
108,458	+		Atu3101	0.28	+0.2
108,501	+		Atu3101	0.33	+0.0
108,576	+		Atu3101	0.41	+0.2
108,576	+		Atu3101	0.41	-0.5
108,584	-		Atu3101	0.42	+0.0
108,584	-		Atu3101	0.42	+0.2
108,735	+		Atu3101	0.59	+0.5
108,750	+		Atu3101	0.61	-1.5
108,774	-		Atu3101	0.64	-0.6
108,789	+		Atu3101	0.65	-0.0
108,792	-		Atu3101	0.66	+0.3
108,893	+		Atu3101	0.77	+0.5
108,937	+		Atu3101	0.82	-0.0
108,958	+		Atu3101	0.85	+0.3
108,966	-		Atu3101	0.86	+0.4
108,966	-		Atu3101	0.86	+0.0
109,046	+				-0.9
109,094	+				+0.2
109,094	+				-0.1
109,106	+				-0.6
109,121	-				-0.6
109,143	-				-0.3
109,180	+				+1.1
109,193	+				-0.9
109,209	-				+0.1
109,254	+				+1.3
109,281	+				+0.2
109,281	+				-0.7
109,361	+		Atu3102	0.15	-0.2
109,409	-		Atu3102	0.19	+0.1
109,454	+		Atu3102	0.22	+0.8
109,462	-		Atu3102	0.23	-0.0
109,520	-		Atu3102	0.28	+1.3
109,685	-		Atu3102	0.41	-0.0
109,712	-		Atu3102	0.43	+0.5
109,712	-		Atu3102	0.43	+0.5
109,788	-		Atu3102	0.49	-0.7
109,986	-		Atu3102	0.64	-0.0
110,042	+		Atu3102	0.69	+1.0
110,050	-		Atu3102	0.69	-0.2
110,115	+		Atu3102	0.74	+0.3
110,196	+		Atu3102	0.81	+0.6
110,204	-		Atu3102	0.81	+0.4
110,204	-		Atu3102	0.81	+0.4
110,214	+		Atu3102	0.82	+0.1
110,230	+		Atu3102	0.83	+0.6
110,252	+		Atu3102	0.85	-0.7
110,426	+				-0.6
110,426	+				+1.2
110,426	+				+0.5
110,459	-				-0.1
110,507	+				+0.1
110,525	+				-0.0
110,533	-				-0.1
110,580	-				-0.0
110,648	+		Atu3103	0.12	+0.4
110,650	+		Atu3103	0.13	-0.9
110,837	+		Atu3103	0.30	-0.1
110,845	-		Atu3103	0.31	+0.6
110,889	+		Atu3103	0.35	-0.3
110,935	-		Atu3103	0.39	-0.0
111,001	+		Atu3103	0.45	-0.0
111,023	+		Atu3103	0.47	-0.1
111,023	+		Atu3103	0.47	-0.1
111,098	-		Atu3103	0.54	+0.9
111,109	-		Atu3103	0.55	+0.4
111,109	-		Atu3103	0.55	-0.2
111,219	+		Atu3103	0.66	-0.3
111,242	+		Atu3103	0.68	+0.2
111,272	-		Atu3103	0.70	-0.9
111,427	+		Atu3103	0.85	+0.5
111,432	+		Atu3103	0.85	+1.3
111,432	+		Atu3103	0.85	-0.0
111,440	-		Atu3103	0.86	-0.1