Strain Fitness in Agrobacterium fabrum C58 around Atu3006

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
2,550	+				-0.8
2,577	+				+1.3
2,790	+		Atu3005	0.51	-0.1
2,818	+		Atu3005	0.58	+0.3
2,904	+		Atu3005	0.79	-1.0
3,265	+				-1.7
3,273	-				+0.0
3,491	-				+1.3
3,516	+				+0.7
3,596	+		Atu3006	0.14	-0.4
3,787	+		Atu3006	0.28	-0.9
4,002	-		Atu3006	0.43	-0.5
4,013	-		Atu3006	0.44	+0.0
4,052	-		Atu3006	0.46	-0.3
4,155	+		Atu3006	0.54	+1.3
4,187	-		Atu3006	0.56	-0.7
4,217	-		Atu3006	0.58	+0.9
4,263	+		Atu3006	0.61	-1.0
4,282	-		Atu3006	0.63	-0.7
4,373	+		Atu3006	0.69	+0.4
4,757	-				-0.4
4,789	-				-0.3
4,935	-		Atu3007	0.41	-0.7
5,166	-				-0.1
5,338	-		Atu3008	0.82	-1.1
5,535	-				-0.1
5,738	+		Atu3009	0.21	+0.3