Strain Fitness in Agrobacterium fabrum C58 around Atu2710

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
2,694,054	-		Atu2709	0.33	-0.1
2,694,056	+		Atu2709	0.33	-0.4
2,694,064	-		Atu2709	0.34	+0.1
2,694,136	+		Atu2709	0.39	-0.4
2,694,225	+		Atu2709	0.45	+0.2
2,694,227	+		Atu2709	0.46	+0.0
2,694,233	-		Atu2709	0.46	-0.3
2,694,235	-		Atu2709	0.46	+1.9
2,694,245	-		Atu2709	0.47	-0.0
2,694,283	+		Atu2709	0.50	-0.8
2,694,283	+		Atu2709	0.50	+0.8
2,694,283	+		Atu2709	0.50	+0.3
2,694,291	-		Atu2709	0.50	+0.2
2,694,318	+		Atu2709	0.52	+0.2
2,694,345	+		Atu2709	0.54	-0.3
2,694,347	-		Atu2709	0.54	+0.3
2,694,361	-		Atu2709	0.55	+0.3
2,694,426	-		Atu2709	0.60	+0.9
2,694,478	+		Atu2709	0.63	+0.1
2,694,542	+		Atu2709	0.68	-0.0
2,694,542	+		Atu2709	0.68	-0.3
2,694,542	+		Atu2709	0.68	+0.3
2,694,564	-		Atu2709	0.70	+0.6
2,694,627	+		Atu2709	0.74	-0.3
2,694,653	-		Atu2709	0.76	+0.1
2,694,693	+		Atu2709	0.79	-0.1
2,694,701	-		Atu2709	0.79	+0.1
2,694,807	+		Atu2709	0.87	+0.2
2,694,807	+		Atu2709	0.87	+0.6
2,694,812	+		Atu2709	0.87	-0.1
2,694,815	+		Atu2709	0.87	+0.4
2,694,840	-		Atu2709	0.89	+0.9
2,694,910	+				-0.1
2,694,972	-				+0.5
2,694,976	-				-0.3
2,695,030	+				-0.2
2,695,091	-				-0.9
2,695,241	-		Atu2710	0.12	-1.3
2,695,279	-		Atu2710	0.15	-0.8
2,695,296	+		Atu2710	0.16	-0.1
2,695,418	-		Atu2710	0.24	-0.8
2,695,474	-		Atu2710	0.28	-1.9
2,695,607	-		Atu2710	0.36	-1.4
2,695,637	+		Atu2710	0.38	-0.9
2,695,656	-		Atu2710	0.40	-0.3
2,695,776	+		Atu2710	0.47	-1.0
2,695,781	+		Atu2710	0.48	-0.8
2,695,827	+		Atu2710	0.51	-1.3
2,695,885	+		Atu2710	0.55	-1.8
2,695,885	+		Atu2710	0.55	-0.3
2,696,043	+		Atu2710	0.65	-0.9
2,696,043	+		Atu2710	0.65	+0.0
2,696,098	-		Atu2710	0.69	-1.8
2,696,133	-		Atu2710	0.71	-1.3
2,696,155	-		Atu2710	0.72	-0.9
2,696,157	-		Atu2710	0.72	-1.5
2,696,186	-		Atu2710	0.74	+0.1
2,696,345	-		Atu2710	0.85	-0.4
2,696,365	+		Atu2710	0.86	-0.2
2,696,377	+		Atu2710	0.87	+0.6
2,696,427	-				-0.7
2,696,525	+				+1.2
2,696,525	+				+0.9
2,696,554	+				-1.7
2,696,565	-				-1.2
2,696,588	-				-0.5
2,696,592	+				-0.2
2,696,600	-				-0.2
2,696,601	-				-0.1
2,696,637	-		Atu2711	0.24	-0.0
2,696,883	+				-0.1
2,696,887	+				-0.0
2,697,012	-		Atu2712	0.27	-0.8
2,697,052	+		Atu2712	0.32	-0.1
2,697,055	-		Atu2712	0.33	+0.9
2,697,167	-		Atu2712	0.48	+0.0
2,697,319	+		Atu2712	0.69	+0.2
2,697,329	+		Atu2712	0.71	-0.3
2,697,389	+		Atu2712	0.79	+0.6
2,697,397	-		Atu2712	0.80	+0.3
2,697,439	+		Atu2712	0.86	-0.5
2,697,450	+		Atu2712	0.88	+0.1
2,697,500	+				+0.1
2,697,500	+				+0.2
2,697,533	+				+0.3
2,697,561	-				-0.2