Strain Fitness in Agrobacterium fabrum C58 around Atu2584

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
2,558,373	+		Atu2583	0.10	-2.1
2,558,384	+		Atu2583	0.11	-2.6
2,558,389	+		Atu2583	0.11	-2.7
2,558,392	-		Atu2583	0.12	-0.5
2,558,392	-		Atu2583	0.12	-0.5
2,558,432	-		Atu2583	0.15	-3.0
2,558,437	-		Atu2583	0.16	-1.0
2,558,698	+		Atu2583	0.40	-0.7
2,558,705	+		Atu2583	0.40	-0.7
2,558,707	+		Atu2583	0.40	-2.8
2,558,786	+		Atu2583	0.48	-2.1
2,558,814	+		Atu2583	0.50	-2.1
2,558,822	-		Atu2583	0.51	-3.2
2,558,861	+		Atu2583	0.54	-2.3
2,558,861	+		Atu2583	0.54	-3.0
2,558,861	+		Atu2583	0.54	-0.5
2,558,861	+		Atu2583	0.54	-2.7
2,558,861	+		Atu2583	0.54	-1.2
2,558,861	+		Atu2583	0.54	-3.8
2,558,861	+		Atu2583	0.54	-2.0
2,558,861	+		Atu2583	0.54	-1.0
2,558,869	-		Atu2583	0.55	-1.1
2,558,869	-		Atu2583	0.55	-2.7
2,558,869	-		Atu2583	0.55	-2.1
2,558,869	-		Atu2583	0.55	-1.4
2,558,869	-		Atu2583	0.55	-1.6
2,558,869	-		Atu2583	0.55	-1.6
2,558,869	-		Atu2583	0.55	-2.6
2,558,869	-		Atu2583	0.55	-2.0
2,558,879	-		Atu2583	0.56	-1.1
2,558,886	-		Atu2583	0.57	-3.0
2,558,900	-		Atu2583	0.58	-2.0
2,559,072	+		Atu2583	0.74	-3.1
2,559,073	+		Atu2583	0.74	-1.0
2,559,112	-		Atu2583	0.77	-0.7
2,559,118	+		Atu2583	0.78	-0.7
2,559,118	+		Atu2583	0.78	+0.0
2,559,172	+		Atu2583	0.83	-2.0
2,559,229	-		Atu2583	0.88	-2.0
2,559,236	-		Atu2583	0.89	-2.3
2,559,244	-		Atu2583	0.89	-1.9
2,559,246	+		Atu2583	0.90	-1.3
2,559,361	-				-1.1
2,559,700	-		Atu2584	0.46	-0.6
2,559,710	+		Atu2584	0.47	-2.7
2,559,734	-		Atu2584	0.51	+0.8
2,559,848	+		Atu2584	0.66	-1.6
2,559,928	+		Atu2584	0.77	-1.8
2,559,943	+		Atu2584	0.79	+1.8
2,560,012	+		Atu2584	0.88	+0.3
2,560,022	+		Atu2584	0.89	-3.3
2,560,036	+				-2.3
2,560,074	+				-0.3
2,560,115	+				-2.3
2,560,128	-				-2.3
2,560,219	-		Atu2585	0.15	+0.3
2,560,225	-		Atu2585	0.16	-2.1
2,560,246	+		Atu2585	0.18	-2.1
2,560,275	-		Atu2585	0.22	+0.3
2,560,386	+		Atu2585	0.35	-1.7
2,560,389	-		Atu2585	0.35	-1.6
2,560,391	+		Atu2585	0.36	-2.9
2,560,437	-		Atu2585	0.41	-0.2
2,560,459	+		Atu2585	0.44	-1.2
2,560,555	+		Atu2585	0.55	-0.7
2,560,641	+		Atu2585	0.65	-1.4
2,560,674	+		Atu2585	0.69	-0.5
2,560,674	+		Atu2585	0.69	-2.7
2,560,675	+		Atu2585	0.69	-1.6
2,560,744	-		Atu2585	0.78	-1.2
2,560,777	+		Atu2585	0.82	-2.3
2,560,866	-				-1.3
2,560,908	+				-1.9
2,560,916	-				-4.2
2,560,937	-				-0.2
2,561,022	+				-1.8