Strain Fitness in Agrobacterium fabrum C58 around Atu2235

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
2,205,746	+				-0.0
2,205,772	+				-0.5
2,205,834	-				-0.3
2,205,890	+				-0.1
2,205,893	+				+0.2
2,206,016	-				+0.2
2,206,030	-				-0.3
2,206,346	-		Atu2234	0.65	+0.3
2,206,427	+		Atu2234	0.82	-0.6
2,206,644	+		Atu2235	0.29	+0.5
2,206,762	-		Atu2235	0.54	+0.2
2,206,947	-				-0.2
2,207,303	+		Atu2236	0.52	+0.0
2,207,303	+		Atu2236	0.52	+0.5
2,207,336	+		Atu2236	0.58	+1.3
2,207,344	-		Atu2236	0.59	+0.7
2,207,367	+		Atu2236	0.63	+0.4
2,207,505	+		Atu2236	0.89	-0.4
2,207,524	+				+0.7
2,207,552	-				-0.9
2,207,627	+				-0.8
2,207,635	-				-0.2
2,207,695	-				+0.3
2,207,827	-				-0.3
2,207,960	-		Atu2237	0.20	+0.6