Strain Fitness in Agrobacterium fabrum C58 around Atu2207

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
2,176,278	+		Atu2205	0.68	-1.4
2,176,278	+		Atu2205	0.68	-0.5
2,176,278	+		Atu2205	0.68	+0.5
2,176,278	+		Atu2205	0.68	-0.7
2,177,180	+				+1.0
2,177,180	+				-0.2
2,177,188	-				+0.1
2,178,185	-		Atu2207	0.73	-1.8
2,178,261	-		Atu2207	0.78	-3.5
2,178,261	-		Atu2207	0.78	-2.0
2,178,344	-		Atu2207	0.84	-2.2
2,178,397	+		Atu2207	0.88	-2.2
2,178,397	+		Atu2207	0.88	-2.5
2,178,590	-				-0.6
2,178,614	-		Atu2208	0.11	-0.2
2,178,759	+		Atu2208	0.54	-0.0
2,178,767	-		Atu2208	0.56	+0.5
2,178,767	-		Atu2208	0.56	+0.7
2,178,934	-				-0.0
2,178,940	+				+0.4
2,179,024	-		Atu2209	0.12	-0.1
2,179,078	+		Atu2209	0.18	+0.9
2,179,374	+		Atu2209	0.54	-0.1
2,179,377	+		Atu2209	0.55	+0.7
2,179,486	-		Atu2209	0.68	-0.4