Strain Fitness in Agrobacterium fabrum C58 around Atu2055

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
2,016,919	-		Atu2054	0.70	-0.1
2,016,939	+		Atu2054	0.71	-0.0
2,016,972	-		Atu2054	0.72	-0.1
2,016,992	-		Atu2054	0.72	-0.3
2,017,003	-		Atu2054	0.73	-0.1
2,017,018	-		Atu2054	0.73	+0.1
2,017,048	-		Atu2054	0.74	-0.8
2,017,081	+		Atu2054	0.75	+0.7
2,017,084	-		Atu2054	0.75	-0.7
2,017,147	+		Atu2054	0.77	+0.2
2,017,152	+		Atu2054	0.78	+0.4
2,017,153	-		Atu2054	0.78	-0.0
2,017,211	-		Atu2054	0.79	+0.9
2,017,243	-		Atu2054	0.80	+0.0
2,017,373	+		Atu2054	0.85	+0.6
2,017,393	-		Atu2054	0.85	-0.1
2,017,451	-		Atu2054	0.87	-0.3
2,017,496	-		Atu2054	0.88	+0.2
2,017,505	+		Atu2054	0.89	+0.4
2,017,550	-				+0.8
2,017,630	-				-0.3
2,017,659	-				-0.4
2,017,671	+				-0.1
2,017,735	-				-1.9
2,017,790	+				-0.3
2,017,873	+				+0.4
2,017,880	-				-0.6
2,017,914	+				+0.6
2,017,968	+				+0.0
2,017,989	+		Atu2055	0.12	-0.2
2,017,997	-		Atu2055	0.12	-0.7
2,018,095	+		Atu2055	0.21	+0.3
2,018,104	-		Atu2055	0.22	+1.0
2,018,183	+		Atu2055	0.28	+1.7
2,018,226	+		Atu2055	0.32	-0.9
2,018,248	-		Atu2055	0.34	-0.0
2,018,521	+		Atu2055	0.58	-0.1
2,018,529	-		Atu2055	0.58	+0.1
2,018,574	+		Atu2055	0.62	+0.1
2,018,606	+		Atu2055	0.65	+0.3
2,018,620	+		Atu2055	0.66	+1.2
2,018,636	+		Atu2055	0.68	+1.6
2,018,949	+				-0.4
2,018,973	+				-0.3
2,018,997	-				-0.1
2,019,040	-				+0.4
2,019,040	-				+0.0
2,019,040	-				-0.1
2,019,040	-				-0.1
2,019,087	+				+0.3
2,019,184	+				+1.7
2,019,383	-		Atu2056	0.37	-0.1
2,019,429	+		Atu2056	0.48	+0.0
2,019,439	+		Atu2056	0.50	+0.0
2,019,446	+		Atu2056	0.52	+0.5
2,019,472	-		Atu2056	0.58	-0.3
2,019,489	+		Atu2056	0.63	-0.1
2,019,572	+		Atu2056	0.83	-0.3
2,019,709	-				-0.1
2,019,741	-				+0.7
2,019,866	-				-0.4
2,019,879	+				+0.9