Strain Fitness in Agrobacterium fabrum C58 around Atu1893

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
1,870,605	+		Atu1891	0.34	+0.1
1,870,722	+		Atu1891	0.49	+0.3
1,870,732	-		Atu1891	0.50	+0.2
1,870,919	-		Atu1891	0.74	+1.0
1,870,927	+		Atu1891	0.75	-0.5
1,870,937	+		Atu1891	0.76	-0.2
1,871,136	-				+0.3
1,871,181	+		Atu1892	0.21	-0.1
1,871,245	-		Atu1892	0.54	+0.7
1,871,278	+		Atu1892	0.71	+1.1
1,871,369	+				+0.4
1,871,618	-		Atu1893	0.41	+0.6
1,871,654	-		Atu1893	0.46	+0.7
1,871,770	+		Atu1893	0.62	+1.2
1,871,783	-		Atu1893	0.64	-0.2
1,871,820	+		Atu1893	0.69	+0.9
1,871,820	+		Atu1893	0.69	+1.5
1,871,828	-		Atu1893	0.70	+0.4
1,871,828	-		Atu1893	0.70	-0.1
1,871,828	-		Atu1893	0.70	+0.0
1,871,828	-		Atu1893	0.70	-0.2
1,871,853	+		Atu1893	0.74	-0.4
1,871,869	+		Atu1893	0.76	-0.0
1,871,870	+		Atu1893	0.76	-0.4
1,871,878	-		Atu1893	0.78	+0.8
1,872,060	+				+0.2
1,872,129	+				-1.5
1,872,304	-				-0.2
1,872,322	+				-0.4
1,872,330	-				-0.6
1,872,344	-				+0.0
1,872,447	+				-0.3
1,872,447	+				-1.4
1,872,447	+				+0.3
1,872,584	+		Atu1895	0.18	-0.1
1,872,600	-		Atu1895	0.20	+0.3
1,872,643	+		Atu1895	0.27	+0.2
1,872,708	+		Atu1895	0.37	+0.6
1,872,897	+		Atu1895	0.67	-0.4
1,872,915	+		Atu1895	0.69	-0.0
1,873,018	+		Atu1895	0.86	-0.1