Strain Fitness in Agrobacterium fabrum C58 around Atu1818

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
1,797,433	-		Atu1817	0.31	+0.1
1,797,444	+		Atu1817	0.32	-0.3
1,797,453	-		Atu1817	0.33	-0.2
1,797,526	-		Atu1817	0.39	-0.0
1,797,570	-		Atu1817	0.43	+1.8
1,797,610	-		Atu1817	0.46	-0.1
1,797,625	-		Atu1817	0.47	-0.0
1,797,730	+		Atu1817	0.56	-0.4
1,797,756	+		Atu1817	0.58	-0.0
1,797,757	+		Atu1817	0.58	-0.1
1,797,759	+		Atu1817	0.58	+0.2
1,797,765	-		Atu1817	0.59	+0.6
1,797,765	-		Atu1817	0.59	-0.1
1,797,844	-		Atu1817	0.65	-0.2
1,797,864	-		Atu1817	0.67	-0.5
1,797,864	-		Atu1817	0.67	-0.6
1,797,869	-		Atu1817	0.67	-0.2
1,797,919	+		Atu1817	0.71	+0.4
1,797,945	+		Atu1817	0.74	+0.5
1,798,054	-		Atu1817	0.83	+0.0
1,798,062	-		Atu1817	0.83	+0.3
1,798,090	+		Atu1817	0.86	+1.6
1,798,090	+		Atu1817	0.86	-0.9
1,798,091	+		Atu1817	0.86	-0.0
1,798,101	+		Atu1817	0.87	-0.3
1,798,109	-		Atu1817	0.87	-0.1
1,798,239	+				-0.3
1,798,322	+				+0.5
1,798,334	-				+0.4
1,798,441	-		Atu1818	0.38	+1.0
1,798,443	-		Atu1818	0.39	+0.3
1,798,511	+		Atu1818	0.63	-0.1
1,798,674	+				-0.0
1,798,682	-				+0.3
1,798,706	+				-0.2
1,798,735	+				-0.4
1,798,740	+				-0.7
1,798,748	-				+0.1