Strain Fitness in Agrobacterium fabrum C58 around Atu1724

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
1,710,886	+		Atu1722	0.46	-0.9
1,710,904	-		Atu1722	0.55	+0.3
1,710,946	+		Atu1722	0.76	-1.0
1,710,948	-		Atu1722	0.77	-0.2
1,711,003	-				+0.7
1,711,345	-				-0.4
1,711,371	+				-0.0
1,711,380	-				+0.2
1,711,411	+				+0.4
1,711,419	-				-0.1
1,711,419	-				-0.0
1,711,426	-				-0.0
1,711,430	+				-0.1
1,711,438	-				-0.4
1,711,441	+				-0.5
1,711,492	+				-1.4
1,711,531	+				-0.6
1,711,531	+				+0.4
1,711,539	-				+0.6
1,711,555	-				-0.5
1,711,560	-				-1.2
1,711,580	-				+0.1
1,711,676	-				-0.2
1,711,793	-				+0.6
1,711,804	+				-0.6
1,711,839	+				-0.3
1,711,952	-		Atu1724	0.47	+0.4
1,711,970	-		Atu1724	0.56	+0.9
1,711,989	-		Atu1724	0.66	+0.1
1,712,016	+		Atu1724	0.79	+0.4
1,712,026	+		Atu1724	0.84	+0.3
1,712,124	-				-0.1
1,712,141	-				+0.2
1,712,210	-				-0.5
1,712,215	-				+0.1
1,712,230	+				+0.8
1,712,274	-				-0.4
1,712,286	-				+0.2
1,712,377	+		Atu1725	0.32	+0.8
1,712,478	+		Atu1725	0.65	-0.2
1,712,491	-		Atu1725	0.69	+0.7
1,712,504	-		Atu1725	0.73	+0.2
1,712,591	+				-0.2
1,712,651	-				-0.3
1,712,765	+				+0.0
1,712,806	+				+0.7
1,712,811	+				-0.3
1,712,819	-				-0.7
1,712,821	+				-0.2
1,712,821	+				-0.9
1,712,844	-				+0.3
1,712,878	+				-0.3
1,712,878	+				-0.2
1,712,886	-				-0.1
1,712,978	+		Atu1726	0.38	-0.2
1,713,022	+		Atu1726	0.64	+0.2
1,713,052	+		Atu1726	0.82	-0.2