Strain Fitness in Agrobacterium fabrum C58 around Atu1439

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
1,432,858	+				-0.7
1,432,859	-				-0.4
1,433,013	+		Atu1438	0.20	-0.4
1,433,015	+		Atu1438	0.20	+0.3
1,433,147	+		Atu1438	0.38	+0.3
1,433,150	-		Atu1438	0.39	+0.0
1,433,173	-		Atu1438	0.42	+1.2
1,433,173	-		Atu1438	0.42	+0.5
1,433,354	-		Atu1438	0.66	+0.4
1,433,453	-		Atu1438	0.80	-0.2
1,433,544	-				-0.3
1,433,604	-				-0.0
1,433,735	+				-0.3
1,433,886	-		Atu1439	0.57	-1.3
1,433,888	-		Atu1439	0.58	-1.4
1,433,954	+		Atu1439	0.82	-1.0
1,434,121	-				+0.0
1,434,125	+				+0.3
1,434,145	+				-0.3
1,434,183	-				-3.1
1,434,214	+		Atu1440	0.10	-0.6
1,434,284	-		Atu1440	0.23	-0.1
1,434,350	+		Atu1440	0.34	-0.9
1,434,369	+		Atu1440	0.38	+0.4
1,434,477	+		Atu1440	0.56	-0.5
1,434,477	+		Atu1440	0.56	-0.3
1,434,485	-		Atu1440	0.58	-0.7
1,434,522	-		Atu1440	0.64	-0.2
1,434,522	-		Atu1440	0.64	+0.5
1,434,523	-		Atu1440	0.65	+0.3