Strain Fitness in Agrobacterium fabrum C58 around Atu1355

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
1,347,971	+				-0.1
1,348,426	+		Atu1354	0.87	-0.9
1,348,426	+		Atu1354	0.87	+0.3
1,348,465	-				+0.0
1,348,475	+				+0.2
1,348,578	-		Atu1355	0.13	-1.3
1,348,582	-		Atu1355	0.14	+0.2
1,348,694	+		Atu1355	0.34	-0.1
1,348,694	+		Atu1355	0.34	+0.9
1,348,702	-		Atu1355	0.35	-1.5
1,348,720	-		Atu1355	0.38	+0.8
1,348,751	-		Atu1355	0.44	+0.3
1,348,843	+		Atu1355	0.60	+0.0
1,348,851	-		Atu1355	0.62	+0.6
1,348,929	-		Atu1355	0.76	+0.4
1,348,957	-		Atu1355	0.81	+1.4
1,348,957	-		Atu1355	0.81	+0.1
1,349,036	+				-0.1
1,349,263	-				+0.1
1,349,513	-		Atu1356	0.29	-0.6
1,349,541	+		Atu1356	0.32	-0.2
1,349,549	-		Atu1356	0.33	-0.2
1,349,728	-		Atu1356	0.49	-0.3
1,349,777	-		Atu1356	0.54	+0.0
1,349,807	-		Atu1356	0.57	-0.2
1,349,847	-		Atu1356	0.60	+0.2
1,349,854	-		Atu1356	0.61	-0.1
1,349,864	-		Atu1356	0.62	+0.3
1,349,939	+		Atu1356	0.69	+0.9
1,349,948	-		Atu1356	0.70	+0.3
1,349,976	+		Atu1356	0.72	+0.2
1,350,017	-		Atu1356	0.76	+0.1