Strain Fitness in Agrobacterium fabrum C58 around Atu1349

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
1,344,527	+				-2.3
1,344,572	-				-1.4
1,344,573	-				-0.5
1,344,806	-				-0.0
1,344,822	+				+0.1
1,344,860	+		Atu1349	0.14	+0.3
1,344,866	-		Atu1349	0.15	+0.4
1,344,870	+		Atu1349	0.17	+0.8
1,344,907	+		Atu1349	0.27	+1.1
1,344,966	+		Atu1349	0.43	+0.2
1,344,966	+		Atu1349	0.43	+0.6
1,344,966	+		Atu1349	0.43	-1.1
1,344,966	+		Atu1349	0.43	-0.3
1,344,971	+		Atu1349	0.44	+0.1
1,344,974	-		Atu1349	0.45	+0.2
1,345,015	-		Atu1349	0.56	+0.4
1,345,035	-		Atu1349	0.61	-0.1
1,345,848	+				+0.0
1,345,957	-				+0.3
1,345,962	-				+0.5
1,346,049	+		Atu1351	0.18	-0.3
1,346,097	-		Atu1351	0.26	-0.7