Experiment: methyl jasmonate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0768 and Atu0769 are separated by 389 nucleotides Atu0769 and Atu8013 overlap by 1 nucleotides Atu8013 and Atu0770 are separated by 28 nucleotides Atu0770 and Atu0771 are separated by 61 nucleotides
Atu0768: Atu0768 - cytochrome-c oxidase chain I, at 763,517 to 765,226
Atu0768
Atu0769: Atu0769 - protoheme IX farnesyltransferase, at 765,616 to 766,569
Atu0769
Atu8013: Atu8013 - hypothetical protein, at 766,569 to 766,700
Atu8013
Atu0770: Atu0770 - cytochrome C oxidase assembly protein, at 766,729 to 767,346
Atu0770
Atu0771: Atu0771 - cytochrome c oxidase subunit III, at 767,408 to 768,283
Atu0771
Position (kb) 765
766
767 Strain fitness (log2 ratio) -2
-1
0
1 at 764.662 kb on + strand, within Atu0768 at 764.714 kb on + strand, within Atu0768 at 764.780 kb on + strand, within Atu0768 at 764.925 kb on + strand, within Atu0768 at 764.965 kb on + strand, within Atu0768 at 765.004 kb on + strand, within Atu0768 at 765.008 kb on - strand, within Atu0768 at 765.026 kb on + strand, within Atu0768 at 765.043 kb on + strand, within Atu0768 at 765.183 kb on - strand at 765.242 kb on + strand at 765.504 kb on - strand at 765.773 kb on + strand, within Atu0769 at 766.356 kb on - strand, within Atu0769 at 766.392 kb on - strand, within Atu0769 at 766.425 kb on + strand, within Atu0769 at 766.537 kb on + strand at 766.629 kb on - strand, within Atu8013 at 766.715 kb on - strand at 766.715 kb on - strand at 766.720 kb on + strand at 766.720 kb on + strand at 766.782 kb on + strand at 766.854 kb on - strand, within Atu0770 at 766.996 kb on + strand, within Atu0770 at 767.030 kb on + strand, within Atu0770 at 767.042 kb on + strand, within Atu0770 at 767.099 kb on - strand, within Atu0770 at 767.252 kb on + strand, within Atu0770 at 767.252 kb on + strand, within Atu0770 at 767.252 kb on + strand, within Atu0770 at 767.260 kb on - strand, within Atu0770 at 767.262 kb on + strand, within Atu0770 at 767.270 kb on - strand, within Atu0770 at 767.468 kb on + strand at 767.561 kb on + strand, within Atu0771
Per-strain Table
Position Strand Gene LocusTag Fraction methyl jasmonate 5 mM remove 764,662 + Atu0768 0.67 -1.3 764,714 + Atu0768 0.70 -1.4 764,780 + Atu0768 0.74 +0.6 764,925 + Atu0768 0.82 -2.7 764,965 + Atu0768 0.85 -1.2 765,004 + Atu0768 0.87 -1.3 765,008 - Atu0768 0.87 +0.2 765,026 + Atu0768 0.88 -0.9 765,043 + Atu0768 0.89 -2.0 765,183 - -0.5 765,242 + -0.3 765,504 - -0.6 765,773 + Atu0769 0.16 -2.2 766,356 - Atu0769 0.78 -1.2 766,392 - Atu0769 0.81 -2.3 766,425 + Atu0769 0.85 -0.4 766,537 + -0.5 766,629 - Atu8013 0.45 +1.2 766,715 - -1.1 766,715 - -0.6 766,720 + +1.0 766,720 + +0.1 766,782 + -0.4 766,854 - Atu0770 0.20 +0.4 766,996 + Atu0770 0.43 -0.5 767,030 + Atu0770 0.49 +0.2 767,042 + Atu0770 0.51 +0.3 767,099 - Atu0770 0.60 -0.2 767,252 + Atu0770 0.85 -0.6 767,252 + Atu0770 0.85 -0.4 767,252 + Atu0770 0.85 -0.2 767,260 - Atu0770 0.86 +0.4 767,262 + Atu0770 0.86 -0.4 767,270 - Atu0770 0.88 -0.4 767,468 + -0.0 767,561 + Atu0771 0.17 +0.1
Or see this region's nucleotide sequence