Strain Fitness in Agrobacterium fabrum C58 around Atu0050

Experiment: methyl jasmonate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl jasmonate 5 mM
50,635	+		Atu0048	0.68	+0.3
50,673	+		Atu0048	0.73	+0.5
50,673	+		Atu0048	0.73	+0.6
50,681	-		Atu0048	0.74	+0.1
50,690	-		Atu0048	0.75	+1.0
50,710	+		Atu0048	0.78	+0.9
50,762	+		Atu0048	0.86	+1.0
50,769	+		Atu0048	0.87	+0.5
50,814	+				+0.5
50,841	+				+0.4
50,841	+				+1.0
50,841	+				+0.6
50,841	+				+1.9
50,849	-				+0.6
50,893	+				+0.8
50,900	+				+0.6
50,900	+				-0.5
50,900	+				+0.4
50,956	-				+0.2
51,023	-				+0.2
51,044	+				+0.6
51,109	-		Atu0049	0.13	-0.3
51,127	+		Atu0049	0.16	-0.8
51,388	+		Atu0049	0.70	-0.4
51,396	-		Atu0049	0.72	-0.5
51,560	+				-1.0
51,568	-				-0.1
51,696	-		Atu0050	0.17	-3.8
51,771	-		Atu0050	0.30	-2.7
51,771	-		Atu0050	0.30	-1.8
51,783	+		Atu0050	0.32	-2.3
51,817	+		Atu0050	0.38	-1.6
51,817	+		Atu0050	0.38	-0.0
51,822	+		Atu0050	0.39	-2.0
51,890	+		Atu0050	0.50	-3.4
51,911	+		Atu0050	0.54	-2.6
51,937	-		Atu0050	0.58	-1.8
51,939	+		Atu0050	0.59	-3.3
51,988	+		Atu0050	0.67	-2.1
51,996	-		Atu0050	0.68	+0.3
52,006	-		Atu0050	0.70	-2.0
52,169	-				-2.8
52,262	-				-0.2
52,297	-				-0.1
52,306	-				-0.3
52,343	-				-2.5
52,396	+		Atu0051	0.11	-1.9
52,441	+		Atu0051	0.14	-2.2
52,464	+		Atu0051	0.16	-3.1
52,472	-		Atu0051	0.17	-1.1
52,472	-		Atu0051	0.17	-1.1
52,491	+		Atu0051	0.18	-2.3
52,510	+		Atu0051	0.19	-2.2
52,653	+		Atu0051	0.30	+0.3
52,796	+		Atu0051	0.41	-3.1
52,913	+		Atu0051	0.50	-3.6
53,157	+		Atu0051	0.69	-2.1