Experiment: methyl jasmonate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3263 and Atu3264 are separated by 74 nucleotides Atu3264 and Atu3265 are separated by 6 nucleotides Atu3265 and Atu3266 are separated by 95 nucleotides
Atu3263: Atu3263 - L-seryl-tRNA(Ser) selenium transferase, at 282,210 to 283,406
Atu3263
Atu3264: Atu3264 - IclR family transcriptional regulator, at 283,481 to 284,332
Atu3264
Atu3265: Atu3265 - hypothetical protein, at 284,339 to 284,821
Atu3265
Atu3266: Atu3266 - dihydroorotase, at 284,917 to 286,140
Atu3266
Position (kb) 283
284
285 Strain fitness (log2 ratio) -1
0
1 at 282.515 kb on + strand, within Atu3263 at 282.528 kb on - strand, within Atu3263 at 282.572 kb on + strand, within Atu3263 at 282.701 kb on + strand, within Atu3263 at 282.709 kb on - strand, within Atu3263 at 282.712 kb on + strand, within Atu3263 at 282.778 kb on + strand, within Atu3263 at 282.786 kb on - strand, within Atu3263 at 282.859 kb on + strand, within Atu3263 at 282.867 kb on - strand, within Atu3263 at 282.921 kb on + strand, within Atu3263 at 282.926 kb on + strand, within Atu3263 at 282.994 kb on - strand, within Atu3263 at 282.994 kb on - strand, within Atu3263 at 283.001 kb on + strand, within Atu3263 at 283.010 kb on + strand, within Atu3263 at 283.091 kb on - strand, within Atu3263 at 283.163 kb on + strand, within Atu3263 at 283.174 kb on - strand, within Atu3263 at 283.307 kb on - strand at 283.307 kb on - strand at 283.331 kb on - strand at 283.357 kb on + strand at 283.694 kb on + strand, within Atu3264 at 283.756 kb on + strand, within Atu3264 at 283.787 kb on + strand, within Atu3264 at 283.876 kb on + strand, within Atu3264 at 283.978 kb on - strand, within Atu3264 at 284.167 kb on + strand, within Atu3264 at 284.276 kb on - strand at 284.276 kb on - strand at 284.278 kb on + strand at 284.278 kb on + strand at 284.278 kb on + strand at 284.284 kb on + strand at 284.326 kb on + strand at 284.420 kb on + strand, within Atu3265 at 284.443 kb on + strand, within Atu3265 at 284.514 kb on + strand, within Atu3265 at 284.523 kb on + strand, within Atu3265 at 284.592 kb on - strand, within Atu3265 at 284.594 kb on + strand, within Atu3265 at 284.683 kb on - strand, within Atu3265 at 284.827 kb on + strand at 284.883 kb on + strand at 284.883 kb on + strand at 284.888 kb on + strand at 284.888 kb on + strand at 284.912 kb on - strand at 284.969 kb on - strand at 284.977 kb on + strand at 284.984 kb on + strand at 285.026 kb on - strand at 285.058 kb on - strand, within Atu3266 at 285.329 kb on - strand, within Atu3266
Per-strain Table
Position Strand Gene LocusTag Fraction methyl jasmonate 5 mM remove 282,515 + Atu3263 0.25 -0.1 282,528 - Atu3263 0.27 -0.4 282,572 + Atu3263 0.30 +0.1 282,701 + Atu3263 0.41 -0.2 282,709 - Atu3263 0.42 -0.5 282,712 + Atu3263 0.42 +0.2 282,778 + Atu3263 0.47 +0.5 282,786 - Atu3263 0.48 +0.4 282,859 + Atu3263 0.54 -0.4 282,867 - Atu3263 0.55 -1.0 282,921 + Atu3263 0.59 +0.4 282,926 + Atu3263 0.60 -0.2 282,994 - Atu3263 0.65 -1.4 282,994 - Atu3263 0.65 +0.2 283,001 + Atu3263 0.66 -0.0 283,010 + Atu3263 0.67 +0.0 283,091 - Atu3263 0.74 -0.5 283,163 + Atu3263 0.80 -0.1 283,174 - Atu3263 0.81 +0.6 283,307 - +0.1 283,307 - -0.9 283,331 - -0.1 283,357 + +0.0 283,694 + Atu3264 0.25 -0.1 283,756 + Atu3264 0.32 +0.1 283,787 + Atu3264 0.36 +0.1 283,876 + Atu3264 0.46 -0.2 283,978 - Atu3264 0.58 -0.6 284,167 + Atu3264 0.81 +0.0 284,276 - -0.3 284,276 - -0.7 284,278 + +0.2 284,278 + -0.4 284,278 + -0.4 284,284 + -1.6 284,326 + -0.4 284,420 + Atu3265 0.17 +0.4 284,443 + Atu3265 0.22 -0.2 284,514 + Atu3265 0.36 -0.2 284,523 + Atu3265 0.38 -0.4 284,592 - Atu3265 0.52 -0.1 284,594 + Atu3265 0.53 -0.1 284,683 - Atu3265 0.71 -0.4 284,827 + -0.1 284,883 + -0.0 284,883 + +0.5 284,888 + -0.7 284,888 + -0.3 284,912 - -0.8 284,969 - +0.1 284,977 + +0.1 284,984 + -0.9 285,026 - -0.1 285,058 - Atu3266 0.12 -0.1 285,329 - Atu3266 0.34 -0.6
Or see this region's nucleotide sequence