Experiment: methyl jasmonate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0138 and Atu0139 are separated by 109 nucleotides Atu0139 and Atu0140 overlap by 1 nucleotides Atu0140 and Atu0141 are separated by 6 nucleotides
Atu0138: Atu0138 - surfeit 1, at 141,629 to 142,459
Atu0138
Atu0139: Atu0139 - cytochrome o ubiquinol oxidase subunit IV, at 142,569 to 142,961
Atu0139
Atu0140: Atu0140 - cytochrome o ubiquinol oxidase subunit III, at 142,961 to 143,587
Atu0140
Atu0141: Atu0141 - cytochrome O ubiquinol oxidase subunit I, at 143,594 to 145,597
Atu0141
Position (kb) 142
143 Strain fitness (log2 ratio) -2
-1
0
1 at 141.574 kb on - strand at 141.726 kb on + strand, within Atu0138 at 141.734 kb on - strand, within Atu0138 at 141.736 kb on + strand, within Atu0138 at 141.795 kb on + strand, within Atu0138 at 141.916 kb on + strand, within Atu0138 at 141.970 kb on + strand, within Atu0138 at 142.003 kb on + strand, within Atu0138 at 142.044 kb on - strand, within Atu0138 at 142.106 kb on + strand, within Atu0138 at 142.106 kb on + strand, within Atu0138 at 142.119 kb on - strand, within Atu0138 at 142.124 kb on + strand, within Atu0138 at 142.183 kb on + strand, within Atu0138 at 142.245 kb on - strand, within Atu0138 at 142.255 kb on + strand, within Atu0138 at 142.255 kb on + strand, within Atu0138 at 142.263 kb on - strand, within Atu0138 at 142.263 kb on - strand, within Atu0138 at 142.290 kb on + strand, within Atu0138 at 142.500 kb on + strand at 142.567 kb on + strand at 142.575 kb on - strand at 142.586 kb on - strand at 142.586 kb on - strand at 142.588 kb on + strand at 143.083 kb on - strand, within Atu0140 at 143.093 kb on - strand, within Atu0140 at 143.227 kb on - strand, within Atu0140 at 143.728 kb on - strand at 143.743 kb on - strand at 143.822 kb on + strand, within Atu0141
Per-strain Table
Position Strand Gene LocusTag Fraction methyl jasmonate 5 mM remove 141,574 - -0.7 141,726 + Atu0138 0.12 -1.0 141,734 - Atu0138 0.13 -1.1 141,736 + Atu0138 0.13 -2.7 141,795 + Atu0138 0.20 -1.6 141,916 + Atu0138 0.35 -2.0 141,970 + Atu0138 0.41 -2.2 142,003 + Atu0138 0.45 -1.8 142,044 - Atu0138 0.50 -1.0 142,106 + Atu0138 0.57 -0.9 142,106 + Atu0138 0.57 -1.2 142,119 - Atu0138 0.59 -0.5 142,124 + Atu0138 0.60 +0.2 142,183 + Atu0138 0.67 +0.1 142,245 - Atu0138 0.74 -1.3 142,255 + Atu0138 0.75 -0.9 142,255 + Atu0138 0.75 -0.6 142,263 - Atu0138 0.76 -1.2 142,263 - Atu0138 0.76 -2.2 142,290 + Atu0138 0.80 -1.1 142,500 + +0.3 142,567 + -0.2 142,575 - -0.8 142,586 - -0.0 142,586 - -0.6 142,588 + -1.2 143,083 - Atu0140 0.19 -0.4 143,093 - Atu0140 0.21 -1.1 143,227 - Atu0140 0.42 -2.1 143,728 - -2.1 143,743 - -1.2 143,822 + Atu0141 0.11 -2.7
Or see this region's nucleotide sequence