Strain Fitness in Agrobacterium fabrum C58 around Atu4106

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
1,225,389	-		Atu4105	0.54	-0.0
1,225,419	-		Atu4105	0.56	+0.5
1,225,432	+		Atu4105	0.57	+0.0
1,225,460	-		Atu4105	0.59	-0.1
1,225,523	+		Atu4105	0.63	+0.1
1,225,587	+		Atu4105	0.67	-0.2
1,225,611	-		Atu4105	0.68	-0.1
1,225,644	+		Atu4105	0.71	-0.1
1,225,654	+		Atu4105	0.71	-0.2
1,225,746	-		Atu4105	0.77	+1.0
1,225,747	+		Atu4105	0.77	-0.2
1,225,778	+		Atu4105	0.79	-0.2
1,225,896	+		Atu4105	0.87	+0.4
1,225,985	+				-0.6
1,226,020	-				+0.0
1,226,020	-				-0.1
1,226,020	-				+1.0
1,226,080	+				+0.4
1,226,087	+				+0.2
1,226,095	+				-0.7
1,226,149	-				+0.2
1,226,221	-				+0.4
1,226,226	-				+0.0
1,226,299	+				+0.5
1,226,329	+				-0.9
1,226,339	-				-0.2
1,226,368	-				+0.2
1,226,389	+		Atu4106	0.10	-0.2
1,226,444	+		Atu4106	0.28	+0.3
1,226,525	+		Atu4106	0.54	+0.2
1,226,557	-		Atu4106	0.65	-0.3
1,226,586	+		Atu4106	0.74	+0.2
1,226,586	+		Atu4106	0.74	+1.2
1,226,594	-		Atu4106	0.77	+1.1
1,226,665	+				-0.3
1,226,859	+		Atu8196	0.12	-0.4
1,226,932	+		Atu8196	0.18	-0.5
1,226,964	+		Atu8196	0.20	+1.4
1,227,026	-		Atu8196	0.25	+0.4
1,227,028	+		Atu8196	0.26	-0.8
1,227,028	+		Atu8196	0.26	+0.7
1,227,113	+		Atu8196	0.33	+0.4
1,227,132	+		Atu8196	0.34	-0.7
1,227,255	+		Atu8196	0.44	+0.0
1,227,262	+		Atu8196	0.45	+1.0
1,227,336	+		Atu8196	0.51	+0.6
1,227,575	+		Atu8196	0.70	+1.1
1,227,626	+		Atu8196	0.74	+0.3