Strain Fitness in Agrobacterium fabrum C58 around Atu3999

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
1,112,411	-		Atu3998	0.28	+0.1
1,112,445	+		Atu3998	0.31	+0.3
1,112,451	+		Atu3998	0.32	-0.4
1,112,453	-		Atu3998	0.32	+0.1
1,112,453	-		Atu3998	0.32	-0.5
1,112,453	-		Atu3998	0.32	+0.1
1,112,453	-		Atu3998	0.32	-0.0
1,112,584	-		Atu3998	0.43	+0.6
1,112,584	-		Atu3998	0.43	-0.6
1,112,722	+		Atu3998	0.55	-0.2
1,112,755	-		Atu3998	0.58	-0.6
1,112,771	-		Atu3998	0.60	-0.1
1,112,802	+		Atu3998	0.62	-0.3
1,112,823	-		Atu3998	0.64	-1.5
1,112,843	-		Atu3998	0.66	+0.1
1,112,907	+		Atu3998	0.71	-0.5
1,112,939	-		Atu3998	0.74	-0.3
1,112,998	+		Atu3998	0.79	-0.7
1,113,065	-		Atu3998	0.85	-0.2
1,113,088	+		Atu3998	0.87	-0.1
1,113,163	+				+0.1
1,113,293	+				+0.4
1,113,349	-		Atu3999	0.19	+0.2
1,113,563	+		Atu3999	0.52	-0.5
1,113,640	+		Atu3999	0.64	-0.8
1,113,820	-				+0.6
1,113,824	+				-0.3
1,113,890	+				+0.2
1,113,890	+				-0.4
1,113,913	-				-0.2
1,113,988	+				-0.0
1,113,996	-		Atu4000	0.10	+0.2
1,114,002	+		Atu4000	0.11	-0.1
1,114,065	-		Atu4000	0.15	+0.1
1,114,072	-		Atu4000	0.16	-1.6
1,114,147	+		Atu4000	0.22	-0.6
1,114,147	+		Atu4000	0.22	+0.0
1,114,155	-		Atu4000	0.22	-0.7
1,114,169	-		Atu4000	0.24	+0.5
1,114,169	-		Atu4000	0.24	+0.2
1,114,282	-		Atu4000	0.32	-0.5
1,114,300	-		Atu4000	0.34	-0.1
1,114,328	-		Atu4000	0.36	+0.1
1,114,352	+		Atu4000	0.38	-0.7
1,114,397	+		Atu4000	0.41	-0.6
1,114,401	+		Atu4000	0.41	+1.2
1,114,401	+		Atu4000	0.41	+0.5
1,114,407	+		Atu4000	0.42	+0.4
1,114,431	-		Atu4000	0.44	+0.0
1,114,454	+		Atu4000	0.46	-0.6
1,114,457	+		Atu4000	0.46	+0.6
1,114,457	-		Atu4000	0.46	-2.8
1,114,485	+		Atu4000	0.48	-0.2
1,114,485	+		Atu4000	0.48	-0.1
1,114,493	-		Atu4000	0.49	+0.0
1,114,509	-		Atu4000	0.50	+0.1
1,114,591	+		Atu4000	0.56	+0.1
1,114,599	-		Atu4000	0.57	+0.3
1,114,640	+		Atu4000	0.60	-0.4
1,114,650	+		Atu4000	0.61	+0.4
1,114,653	-		Atu4000	0.61	+1.5
1,114,686	-		Atu4000	0.63	-1.2
1,114,688	-		Atu4000	0.64	-0.2
1,114,725	+		Atu4000	0.67	+0.3
1,114,800	+		Atu4000	0.72	+0.4
1,114,803	-		Atu4000	0.73	-0.0