Strain Fitness in Agrobacterium fabrum C58 around Atu2809

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
2,811,392	+		Atu2808	0.31	+0.6
2,811,416	-		Atu2808	0.33	-0.4
2,811,475	+		Atu2808	0.37	-0.8
2,811,480	-		Atu2808	0.37	-0.9
2,811,517	-		Atu2808	0.40	-0.3
2,811,655	+		Atu2808	0.49	-0.7
2,811,655	-		Atu2808	0.49	-0.5
2,811,691	+		Atu2808	0.52	-1.3
2,811,711	+		Atu2808	0.53	-0.4
2,811,849	-		Atu2808	0.62	-1.1
2,811,996	-		Atu2808	0.72	-0.4
2,812,074	-		Atu2808	0.78	+0.3
2,812,326	+				-0.7
2,812,493	-		Atu2809	0.11	-0.9
2,812,587	+		Atu2809	0.21	+0.2
2,812,710	+		Atu2809	0.34	-1.7
2,812,710	+		Atu2809	0.34	-0.2
2,812,711	-		Atu2809	0.34	-1.0
2,812,718	-		Atu2809	0.35	-0.6
2,812,718	-		Atu2809	0.35	-0.9
2,812,718	-		Atu2809	0.35	-0.8
2,812,767	+		Atu2809	0.40	-0.4
2,812,832	+		Atu2809	0.46	-0.6
2,812,935	+		Atu2809	0.57	-1.8
2,812,943	-		Atu2809	0.58	-1.0
2,813,013	-		Atu2809	0.65	+0.6
2,813,037	+		Atu2809	0.68	-0.0
2,813,107	+		Atu2809	0.75	-0.1
2,813,142	+		Atu2809	0.78	-0.7
2,813,358	-				-0.3
2,813,433	+				+0.0
2,813,433	+				-0.2
2,813,433	+				-0.6
2,813,463	+		Atu2810	0.11	+0.3
2,813,476	+		Atu2810	0.12	+0.0
2,813,600	-		Atu2810	0.24	+0.3
2,813,620	-		Atu2810	0.26	-0.5
2,813,660	+		Atu2810	0.30	+0.5
2,813,660	+		Atu2810	0.30	-1.7
2,813,660	+		Atu2810	0.30	-0.4
2,813,660	+		Atu2810	0.30	+0.8
2,813,660	+		Atu2810	0.30	-0.2
2,813,765	+		Atu2810	0.40	-0.5
2,813,773	-		Atu2810	0.41	+0.1
2,813,773	-		Atu2810	0.41	-0.9
2,813,773	-		Atu2810	0.41	-0.5
2,813,773	-		Atu2810	0.41	-0.2
2,813,788	-		Atu2810	0.42	-0.8
2,813,882	+		Atu2810	0.51	-0.4
2,813,888	+		Atu2810	0.52	-0.8
2,813,932	-		Atu2810	0.56	-1.1
2,813,942	+		Atu2810	0.57	+0.5
2,814,074	+		Atu2810	0.69	-0.6
2,814,074	+		Atu2810	0.69	+0.7
2,814,082	-		Atu2810	0.70	-0.3
2,814,116	-		Atu2810	0.73	-0.6
2,814,228	-		Atu2810	0.84	-0.6
2,814,237	+		Atu2810	0.85	-0.6
2,814,243	-		Atu2810	0.85	+0.5
2,814,263	-		Atu2810	0.87	-1.7
2,814,307	-				-0.9