Strain Fitness in Agrobacterium fabrum C58 around Atu2805

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
2,807,396	+		Atu2804	0.72	-1.1
2,807,396	+		Atu2804	0.72	-0.6
2,807,496	+		Atu2804	0.75	-0.6
2,807,504	-		Atu2804	0.75	-2.4
2,807,595	-		Atu2804	0.78	-1.2
2,807,624	+		Atu2804	0.79	-1.9
2,807,632	-		Atu2804	0.79	-1.2
2,807,685	-		Atu2804	0.81	-0.6
2,807,956	+		Atu2804	0.89	-2.6
2,808,088	-				-0.7
2,808,090	+				-0.4
2,808,151	-				-0.8
2,808,190	-				-0.7
2,808,406	-				+0.5
2,808,494	+				-0.9
2,808,511	+		Atu2805	0.12	-0.2
2,808,664	+		Atu2805	0.26	-0.9
2,808,672	-		Atu2805	0.27	-1.0
2,808,672	-		Atu2805	0.27	-0.2
2,808,746	+		Atu2805	0.34	-0.9
2,808,749	-		Atu2805	0.34	-2.1
2,808,754	-		Atu2805	0.35	-0.6
2,808,823	+		Atu2805	0.42	-0.3
2,808,869	+		Atu2805	0.46	+0.8
2,809,047	-		Atu2805	0.63	-1.1
2,809,082	-		Atu2805	0.67	+0.8
2,809,112	-		Atu2805	0.69	-1.0
2,809,126	-		Atu2805	0.71	-1.7
2,809,254	-		Atu2805	0.83	-1.1
2,809,351	+				-0.7
2,809,386	-				-0.2
2,809,396	+				-0.7
2,809,411	+				-0.5
2,809,419	-				-0.7
2,809,434	+				+1.0
2,809,478	+		Atu2806	0.12	+0.4
2,809,479	+		Atu2806	0.12	+0.1
2,809,538	+		Atu2806	0.25	+0.2
2,809,600	-		Atu2806	0.38	-0.4
2,809,632	-		Atu2806	0.45	+0.3
2,809,678	-		Atu2806	0.55	-0.1
2,809,789	-		Atu2806	0.79	+0.3
2,809,806	-		Atu2806	0.83	+0.0
2,809,806	-		Atu2806	0.83	-0.4
2,809,904	-				+0.4
2,809,947	+				+1.5
2,810,029	-				-0.2
2,810,066	-				-0.3
2,810,073	-				+0.3
2,810,181	+				+0.2
2,810,181	+				+0.3
2,810,181	+				+0.5
2,810,189	-				+0.3
2,810,189	-				+0.0
2,810,189	-				-0.1
2,810,189	-				+0.3
2,810,204	+				+0.1
2,810,212	-				+0.0
2,810,219	+				-0.3
2,810,227	-				-1.3
2,810,289	-				+0.5
2,810,304	+				+0.1
2,810,310	-				+0.4
2,810,332	-				-1.9
2,810,377	+				-1.3