Strain Fitness in Agrobacterium fabrum C58 around Atu2801

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
2,801,230	+		Atu2799	0.65	-1.2
2,801,367	+		Atu2799	0.83	-0.2
2,801,445	+				-0.6
2,801,735	+		Atu2800	0.35	-1.3
2,801,931	-		Atu2800	0.60	+0.0
2,802,095	+		Atu2800	0.82	-0.1
2,802,235	-				-0.7
2,802,504	+		Atu2801	0.36	-0.4
2,802,642	-		Atu2801	0.54	-0.2
2,802,697	+		Atu2801	0.61	-0.3
2,802,705	-		Atu2801	0.62	-0.6
2,802,724	-		Atu2801	0.65	-0.5
2,802,789	-		Atu2801	0.73	+0.1
2,802,794	-		Atu2801	0.74	-0.3
2,802,816	+		Atu2801	0.77	-1.0
2,802,931	-				+0.6
2,802,933	+				-1.2
2,802,938	+				-0.9
2,802,941	-				-0.2
2,802,941	-				-0.7
2,802,958	+				+0.3
2,802,996	-				-0.4
2,803,046	+				-0.7
2,803,054	-				-0.6
2,803,076	-		Atu2802	0.13	-0.8
2,803,087	+		Atu2802	0.15	-1.2
2,803,089	+		Atu2802	0.15	-0.2
2,803,225	-		Atu2802	0.37	-0.3
2,803,341	+		Atu2802	0.55	-0.7
2,803,366	+		Atu2802	0.59	-1.0
2,803,405	-		Atu2802	0.65	+1.2
2,803,501	-		Atu2802	0.80	-0.9
2,803,625	+				-0.4
2,803,818	-		Atu2803	0.15	+0.2
2,803,845	+		Atu2803	0.17	-0.2
2,803,868	-		Atu2803	0.18	-0.5
2,803,879	+		Atu2803	0.19	-0.6