Strain Fitness in Agrobacterium fabrum C58 around Atu2798

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
2,798,467	+		Atu2796	0.24	-0.2
2,798,651	+		Atu2796	0.48	-0.9
2,798,651	+		Atu2796	0.48	-0.8
2,798,659	-		Atu2796	0.49	+1.6
2,798,659	-		Atu2796	0.49	+0.6
2,798,666	-		Atu2796	0.50	-1.5
2,798,740	+		Atu2796	0.59	+0.2
2,798,974	-		Atu2796	0.90	-1.4
2,799,026	+				-0.7
2,799,070	+				-0.0
2,799,094	-		Atu2797	0.10	-0.0
2,799,168	+		Atu2797	0.27	-0.6
2,799,195	+		Atu2797	0.33	+0.1
2,799,330	-		Atu2797	0.64	-0.7
2,799,444	-				-0.5
2,799,471	+				+0.3
2,799,471	+				-0.2
2,799,489	-				-0.5
2,799,539	+				+0.3
2,799,673	+		Atu2798	0.17	-0.3
2,799,810	+		Atu2798	0.28	-0.6
2,800,048	-		Atu2798	0.46	+0.0
2,800,224	+		Atu2798	0.60	-0.7
2,800,286	-		Atu2798	0.65	-1.9
2,800,424	+		Atu2798	0.76	-0.4
2,800,514	+		Atu2798	0.83	+0.8
2,800,527	-		Atu2798	0.84	-1.7
2,800,643	+				-0.8
2,800,693	-				+0.6
2,800,729	+				+0.2
2,800,736	-				-0.7
2,800,821	-		Atu2799	0.13	-1.8
2,800,847	-		Atu2799	0.16	-0.6
2,800,892	-		Atu2799	0.22	-0.4
2,800,948	-		Atu2799	0.29	+0.4
2,801,057	-		Atu2799	0.43	-0.5
2,801,078	-		Atu2799	0.46	-0.6
2,801,103	-		Atu2799	0.49	-0.9
2,801,230	+		Atu2799	0.65	-1.2
2,801,367	+		Atu2799	0.83	-0.2
2,801,445	+				-0.6