Strain Fitness in Agrobacterium fabrum C58 around Atu2692

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
2,675,251	-		Atu2691	0.81	+0.1
2,675,327	+		Atu2691	0.87	-0.4
2,675,365	-				+0.6
2,675,365	-				+0.6
2,675,377	-				-0.7
2,675,479	+				+1.0
2,675,540	-				+0.1
2,675,620	+				+0.2
2,675,655	+				+0.3
2,675,699	-		Atu8092	0.12	+0.0
2,675,847	+		Atu8092	0.37	-0.2
2,675,847	+		Atu8092	0.37	-0.2
2,675,847	+		Atu8092	0.37	-0.8
2,675,855	-		Atu8092	0.38	-0.1
2,675,855	-		Atu8092	0.38	+0.1
2,675,996	+		Atu8092	0.62	-0.1
2,676,004	-		Atu8092	0.63	+0.0
2,676,014	-		Atu8092	0.65	+0.2
2,676,024	+		Atu8092	0.66	-0.6
2,676,024	+		Atu8092	0.66	-0.3
2,676,025	+		Atu8092	0.67	-0.4
2,676,032	-		Atu8092	0.68	+0.1
2,676,047	-		Atu8092	0.70	+0.8
2,676,075	+		Atu8092	0.75	+1.1
2,676,083	-		Atu8092	0.76	+0.8
2,676,177	-				+1.0
2,676,186	-				-0.5
2,676,296	-		Atu2692	0.12	-0.1
2,676,367	+		Atu2692	0.23	-1.1
2,676,370	-		Atu2692	0.23	-1.3
2,676,375	-		Atu2692	0.24	-1.6
2,676,398	+		Atu2692	0.27	-0.3
2,676,660	-		Atu2692	0.68	-0.4
2,676,732	-		Atu2692	0.79	-0.7